Query= MSMg01no116_c10.b1 MSMg01no116_c10.b1 CHROMAT_FILE:
MSMg01no116_c10.b1 PHD_FILE: MSMg01no116_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:19 2005
(497 letters)
>mm_chr14_105470346_105471242
Length = 897
Score = 915 bits (473), Expect = 0.0
Identities = 491/497 (98%)
Strand = Plus / Minus
Query: 1 cagagttgtctacttttaaagtaccgagggcaattcatcagccgttacactttggttaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 cagagttgtctacttttaaagtaccgagggcaattcatcagccgttacactttggttaaa 638
Query: 61 tactaatcaagtttcttttttccctccttgccaagcaagccagaagagctgtgatggtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 tactaatcaagtttcttttttccctccttgccaagcaagccagaagagctgtgatggtag 578
Query: 121 cggaatgggcaagcccccactaggtctccttgaagtgttcgtggctttaatgtgtatgag 180
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 577 cggaatgggcaagcccccactaggccgccttgaagtgttcgtggctttaatgtgtatgag 518
Query: 181 gagcacacgcttaacatgtaaataaatgtcagtttcgtaaaagtcgcgtgtatcaagcaa 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 517 gagcacacgcttaacatgtaaataaatgtcagtttcgtaaaagtcgcatgtatcaagcaa 458
Query: 241 gagagtcaagtggtgggatgtagatttacaaaggatgggtttccagcttcctgttcccac 300
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 457 gagcgtcaagtggtgggatgtagatttacaaaggataggtttccagcttcctgttcccac 398
Query: 301 ttcctgggcatttgtttcttccagtaaacttctattccatctcgtttcattccgacagga 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 397 ttcctgggcatttgtttcttccagtaaacttctattccatctcgtttcatcccgacagga 338
Query: 361 cgtactgatgtgcatggcaaattctgtaccacttgtgccaccgggaacactgactcccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 cgtactgatgtgcatggcaaattctgtaccacttgtgccaccgggaacactgactcccca 278
Query: 421 gtgacccttgtccccttgatgtaagctcacgcatcattctgcatccttgaaattcaagtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gtgacccttgtccccttgatgtaagctcacgcatcattctgcatccttgaaattcaagtg 218
Query: 481 acaagacacaagtgcgg 497
|||||||||||||||||
Sbjct: 217 acaagacacaagtgcgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_c10.g1 MSMg01no116_c10.g1 CHROMAT_FILE:
MSMg01no116_c10.g1 PHD_FILE: MSMg01no116_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:19 2005
(496 letters)
>mm_chr14_105331200_105332087
Length = 888
Score = 891 bits (461), Expect = 0.0
Identities = 484/499 (96%), Gaps = 14/499 (2%)
Strand = Plus / Plus
Query: 1 ttctattagggttcttacttgtaaagttaaaatgtgaacatctacagaaaatcatgtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctattagggttcttacttgtaaagttaaaatgtgaacatctacagaaaatcatgtgaa 260
Query: 61 aaatatcatttctggcggtgggggagtctagttactctcattttcatcggtgaagaggta 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 aaatatcatttctggcggtgggggagtctagttactctcattttgatcggtgaagaggta 320
Query: 121 aaattggcagagaaggttggctcagaagacctcttcggcttgtgatcacacactcactta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaattggcagagaaggttggctcagaagacctcttcggcttgtgatcacacactcactta 380
Query: 181 agctggacttcctat---tcttctggagtattgcaaaactccagacctgaaagaaaactt 237
||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 381 agctggacttcctataagtc-------gtattgcaaaactccagacctgaaagaaaactt 433
Query: 238 gggcagcactttcccttcctcagagccacgatgttgtgacccaccttgcacagcagctcc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gggcagcactttcccttcctcagagccacgatgttgtgacccaccttgcacagcagctcc 493
Query: 298 tacagaggaggaggagtgcttgccttgctcactcctactctttcagcacagccgacttcc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tacagaggaggaggagtgcttgccttgctcactcctactctttcagcacagccgacttcc 553
Query: 358 aacacttacttagttcttcagcagatgcacataagatgaaggtatatattgaactcaaga 417
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aacactta----gttcttcagcagatgcacataagatgaaggtatatattgaactcaaga 609
Query: 418 cttaaccatcatgcaacgtgattttgtttcctaataacccttgaaaatacatgcaacagg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cttaaccatcatgcaacgtgattttgtttcctaataacccttgaaaatacatgcaacagg 669
Query: 478 ttttacccctgctgccact 496
|||||||||||||||||||
Sbjct: 670 ttttacccctgctgccact 688
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 888
Length adjustment: 10
Effective length of query: 486
Effective length of database: 878
Effective search space: 426708
Effective search space used: 426708
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
