Query= MSMg01no117_b05.b1 MSMg01no117_b05.b1 CHROMAT_FILE:
MSMg01no117_b05.b1 PHD_FILE: MSMg01no117_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:31 2005
(620 letters)
>mm_chr14_30263791_30264811
Length = 1021
Score = 1145 bits (592), Expect = 0.0
Identities = 611/618 (98%), Gaps = 3/618 (0%)
Strand = Plus / Minus
Query: 5 gaattcaccgaagatcac--ttgacattccttttctgggttcattaatgtctttaagagg 62
|||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gaattcaccgaaga-cacatttgacattccttttctgggttcattaatgtctttaagagg 763
Query: 63 aaaatttcttggagcctcccagagtactttgtcttcattattaaatcctagtcgttgatt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 aaaatttcttggagcctcccagagtactttgtcttcattattaaatcctagtcgttgatt 703
Query: 123 atattctatgcttgcaaaaatttcagggactttttgaattacaagtgacatttagctata 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 atattctatgcttgcaaaaatttcagggactttttgaattacaagtgacatttagctata 643
Query: 183 gggcaggtggtctgggaacatgttctcttgttaaaaatttcaggattgcttccacactct 242
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 642 gggcaggtggtctgggaacatgctctcttgttaaaaatttcaggattgcttccacactct 583
Query: 243 taaaatcaacttagaagacactgatatctggggcccgaggctttcttcttcctgtcttca 302
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 taaaatcaacttagaagatactgatatctggggcccgaggctttcttcttcctgtcttca 523
Query: 303 aaggcagcattaactgtcagcttaaaatcagaaagtctccttggctggactcttcctatg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 aaggcagcattaactgtcagcttaaaatcagaaagtctccttggctggactcttcctatg 463
Query: 363 ggacgttacaggtctcacaggctctaaccctgactgtgttttgaccttgaatcccagttg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ggacgttacaggtctcacaggctctaaccctgactgtgttttgaccttgaatcccagttg 403
Query: 423 catccccagcaggaccatatccagcatccgtagaggacagcttcttactggggtatctat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 catccccagcaggaccatatccagcatccgtagaggacagcttcttactggggtatctat 343
Query: 483 agttcagatcgccaggtgggtggcatttttgcgcctggaggaatttcatatttaggctgt 542
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 342 agttcagatcgccaggtgggtggcatttttgcggctggaggaattgcatatttaggctgt 283
Query: 543 atgggagactaggtagtttgatggccactgcactatgagtgatgaaactgccatctacag 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 atgggagactaggtagtttgatggccactgcactatgagtgatgaaactgccatctacag 223
Query: 603 aaactaaataagtttcca 620
||||||||||||||||||
Sbjct: 222 aaactaaataagtttcca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1021
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1011
Effective search space: 616710
Effective search space used: 616710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_b05.g1 MSMg01no117_b05.g1 CHROMAT_FILE:
MSMg01no117_b05.g1 PHD_FILE: MSMg01no117_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:31 2005
(603 letters)
>mm_chr14_30091750_30092752
Length = 1003
Score = 1106 bits (572), Expect = 0.0
Identities = 587/592 (99%)
Strand = Plus / Plus
Query: 12 gaacaggagacattgtgagactcttagtgagtctttgggtactcccttcatgtctccacc 71
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 212 gaacaggagacattgtgagactcttagtgagtctctgggtactccctacatgtctccacc 271
Query: 72 caagagagctcaaacaaaggggagtactagacaggcagtgctttctgtccacccagggct 131
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 caagagatctcaaacaaaggggagtactagacaggcagtgctttctgtccacccagggct 331
Query: 132 ctcaaaccagcaggagatactaggccacagatataggctttgcaggtaagttctggaact 191
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ctcaaaccagcaggaggtactaggccacagatataggctttgcaggtaagttctggaact 391
Query: 192 tgcctggtggtcggcaagttctttaactttgtttctttagctctaaaggagtacactacc 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgcctggtggtcggcaagttctttaactttgtttctttagctctaaaggagtacactacc 451
Query: 252 catatcattatcaacagcatcctgtcaggagcagcaaagtaatgcttgctcagggctctg 311
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 catattattatcaacagcatcctgtcaggagcagcaaagtaatgcttgctcagggctctg 511
Query: 312 tgagtggttggctagcatccaggaaggccccaagacatgtgatacatgccaggtaacatg 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tgagtggttggctagcatccaggaaggccccaagacatgtgatacatgccaggtaacatg 571
Query: 372 ctgctcatgtgatgggcatagcagacatgccctaatctcagagcattctgcttctcatgg 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ctgctcatgtgatgggcatagcagacatgccctaatctcagagcattctgcttctcatgg 631
Query: 432 atgagattgacaagcacaactcactgtcccaggtctttctctgtctaagatgagaagtgg 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 atgagattgacaagcacaactcactgtcccaggtctttctctgtctaagatgagaagtgg 691
Query: 492 ggcacagacagggaaacctgtaaggaagactagggcaacctcagtcatgtagttggcagg 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ggcacagacagggaaacctgtaaggaagactagggcaacctcagtcatgtagttggcagg 751
Query: 552 aaaatcagaaaaggagcatgtaagacaggctgtgagaacttaaaaagagggt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 aaaatcagaaaaggagcatgtaagacaggctgtgagaacttaaaaagagggt 803
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space: 588849
Effective search space used: 588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
