Query= MSMg01no117_b08.b1 MSMg01no117_b08.b1 CHROMAT_FILE:
MSMg01no117_b08.b1 PHD_FILE: MSMg01no117_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:31 2005
(612 letters)
>mm_chr14_17967716_17968726
Length = 1011
Score = 1106 bits (572), Expect = 0.0
Identities = 602/616 (97%), Gaps = 9/616 (1%)
Strand = Plus / Plus
Query: 4 ggaattctctctgaaactctgatgtttttcttttttttttttccc-aagaaagcagttta 62
|||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 204 ggaattctctctgaaattttgatgtttttc--ttttttttttcccaaagaaagcagttta 261
Query: 63 atacatcttgccccttttgagcccacctccctattatgtcaattcagaaaaaatgaatga 122
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 262 atacatcttgccccttttgagcccacctccctattatttcaattcagaaaaaatgaatga 321
Query: 123 gattcatggcaactaatataattgctttctcaagacccaggctcctgaagtgttgcccca 182
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gattcatggcaactaatacaattgctttctcaagacccaggctcctgaagtgttgcccca 381
Query: 183 gtctatttctgaccccttgaactcatagaggagagattaaggtagagaaccttgccattc 242
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 382 gtctatttctgaccccttgaactcatagaggggagattaaggtagagaaccttgccattc 441
Query: 243 aaatcattgtcaatataagacatggtaaaatgtagcctttgtatttccctaaggcaaata 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaatcattgtcaatataagacatggtaaaatgtagcctttgtatttccctaaggcaaata 501
Query: 303 agtatgagcctagtaaccagagttacatgatgaagaatggtttgttcaatagactggaaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 agtatgagcctagtaaccagagttacatgatgaagaatggtttgttcaatagactggaaa 561
Query: 363 tggcctaaagcacagagtgtctgagacactctgggtctcagaatgacaagggggagacaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tggcctaaagcacagagtgtctgagacactctgggtctcagaatgacaagggggagacaa 621
Query: 423 gctaagtgataagcaaatgtcacatagatcactgggtttggggttagtcttagttagggt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gctaagtgataagcaaatgtcacatagatcactgggtttggggttagtcttagttagggt 681
Query: 483 ttctattcctgcacacacattatgaccaagaagcaagttggggatgaaagggtttatcca 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ttctattcctgcacacacattatgaccaagaagcaagttggggatgaaagggtttatcca 741
Query: 543 gcttacacttccatgt------tcatcaccaaaggagatcaggactggaactcaagcagg 596
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gcttacacttccatgtagctgttcatcaccaaaggagatcaggactggaactcaagcagg 801
Query: 597 tcaggaagcaggagct 612
||||||||||||||||
Sbjct: 802 tcaggaagcaggagct 817
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1011
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1001
Effective search space: 602602
Effective search space used: 602602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_b08.g1 MSMg01no117_b08.g1 CHROMAT_FILE:
MSMg01no117_b08.g1 PHD_FILE: MSMg01no117_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:31 2005
(456 letters)
>mm_chr14_18128610_18129465
Length = 856
Score = 729 bits (377), Expect = 0.0
Identities = 393/403 (97%), Gaps = 8/403 (1%)
Strand = Plus / Minus
Query: 1 agaaggagagttttgaagaggaatttaggtcaccatggtgaaggcctcttcaccatctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 agaaggagagttttgaagaggaatttaggtcaccatggtgaaggcctcttcaccatctag 336
Query: 61 tagaaaggacttgagtgacatgcacatcttcccaggaagtgatccaccacattaacacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tagaaaggacttgagtgacatgcacatcttcccaggaagtgatccaccacattaacacaa 276
Query: 121 tcctgcagtgccaggtcatccaaaatccttgtcctatctcaagactgtcctgttttgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 275 tcctgcagtgccaggtcatccaaaatccttgtcctatctcaagactgtcctgttttgttt 216
Query: 181 ttgtttttaaaaagattatttatttatttatttatttatttatttatttatttatttatt 240
||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 215 ttgtttttaaaaaga--------ttatttatttatttatttatttatttatttatttatt 164
Query: 241 tatttgggttttgtatatgagtatactgttactgtttccagacacaccagaagaggactt 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tagttgggttttgtatatgagtatactgttactgtttccagacacaccagaagaggactt 104
Query: 301 cagatcccattacagatggttgtgagctacaatgccgttgctgagaattgaactcaggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 cagatcccattacagatggttgtgagctacaatgccgttgctgagaattgaactcaggac 44
Query: 361 ctgtggaagagcagaaagtgctctttatctctgagcccatctc 403
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 ctgtggaagagcagaaagtgctctttatctctgagcccatctc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
