MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-118M21
Chromosome	14 (Build37)
Map Location	122,446,134 - 122,446,782
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Farp1, LOC100043837, Stk24, Slc15a1, LOC100043577, Dock9, LOC668843, Phgdhl1, Gpr18, Ebi2, Timm8a2
Downstream gene	Tm9sf2, LOC621710, Clybl, 1700108J01Rik, EG328479, EG432907, Zic5, Zic2, ENSMUSG00000075465, LOC668847, Pcca, BC006662, 4930594M22Rik, Tmtc4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Farp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223254 MGI:2446173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043837 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043837
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Stk24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223255 MGI:2385007
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc15a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56643 MGI:1861376
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043577 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043577
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Dock9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105445 MGI:106321
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668843 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668843
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Phgdhl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68889 MGI:1916139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110168 MGI:107859
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ebi2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:321019 MGI:2442034
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Timm8a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223262 MGI:3615492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tm9sf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68059 MGI:1915309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC621710 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 125 ESTs, 29 Proteins pseudo : _no_value

name	Clybl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69634 MGI:1916884
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700108J01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68245 MGI:1915495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 7 ESTs

name	EG328479 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328479 MGI:3644731
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG432907 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432907 MGI:3645502
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Zic5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65100 MGI:1929518
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zic2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22772 MGI:106679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	ENSMUSG00000075465 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100038380 MGI:3642026
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC668847 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668847
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Pcca (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110821 MGI:97499
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC006662 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223267 MGI:2385008
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930594M22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:654799 MGI:1925478
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmtc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70551 MGI:1921050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Farp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110349751 GeneID:223254 MGI:2446173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) transcript_id : NM_134082.3

name	LOC100043837 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265878 GeneID:100043837
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to CG2861-PB transcript_id : XM_001481050.1

name	Stk24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110349735 GeneID:223255 MGI:2385007
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine/threonine kinase 24 (STE20 homolog, yeast) transcript_id : NM_145465.2

name	Slc15a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119392091 GeneID:56643 MGI:1861376
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 15 (oligopeptide transporter), member 1 transcript_id : NM_053079.2

name	LOC100043577 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265770 GeneID:100043577
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) transcript_id : XM_001480444.1

name	Dock9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486663 GeneID:105445 MGI:106321
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dedicator of cytokinesis 9 transcript_id : NM_001081039.1

name	Phgdhl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90568035 GeneID:68889 MGI:1916139
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoglycerate dehydrogenase like 1 transcript_id : NM_026861.2

name	Gpr18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33413405 GeneID:110168 MGI:107859
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 18 transcript_id : NM_182806.1

name	Ebi2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88853592 GeneID:321019 MGI:2442034
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Epstein-Barr virus induced gene 2 transcript_id : NM_183031.2

name	Timm8a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83627686 GeneID:223262 MGI:3615492
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocase of inner mitochondrial membrane 8 homolog a2 (yeast) transcript_id : NM_001037744.1

name	Tm9sf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981521 GeneID:68059 MGI:1915309
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane 9 superfamily member 2 transcript_id : NM_080556.2

name	Clybl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475692 GeneID:69634 MGI:1916884
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : citrate lyase beta like transcript_id : NM_029556.2

name	1700108J01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265881 GeneID:68245 MGI:1915495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 7 ESTs product : RIKEN cDNA 1700108J01 gene transcript_id : XM_001481058.1

name	EG328479 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370587 GeneID:328479 MGI:3644731
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG328479 transcript_id : NM_177817.3

name	Zic5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801922 GeneID:65100 MGI:1929518
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein of the cerebellum 5 transcript_id : NM_022987.2

name	Zic2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112734852 GeneID:22772 MGI:106679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Zic finger protein of the cerebellum 2 transcript_id : NM_009574.3

name	ENSMUSG00000075465 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265883 GeneID:100038380 MGI:3642026
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, ENSMUSG00000075465 transcript_id : XM_001481061.1

name	Pcca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450240 GeneID:110821 MGI:97499
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : propionyl-Coenzyme A carboxylase, alpha polypeptide transcript_id : NM_144844.1

name	BC006662 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703923 GeneID:223267 MGI:2385008
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC006662 transcript_id : NM_145466.1

name	Tmtc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345158 GeneID:70551 MGI:1921050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane and tetratricopeptide repeat containing 4 transcript_id : NM_028651.2

name	Farp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110349752 GeneID:223254 MGI:2446173
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005737 - cytoplasm [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008092 - cytoskeletal protein binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 note : FERMRhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) product : FERMRhoGEF (Arhgef) and pleckstrin domain protein 1 protein_id : NP_598843.3

name	LOC100043837 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265879 GeneID:100043837
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481100.1

name	Stk24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703922 GeneID:223255 MGI:2385007
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : mammalian sterile twenty 3 kinase product : serine/threonine protein kinase 24 protein_id : NP_663440.1

name	Slc15a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119392092 GeneID:56643 MGI:1861376
definition	GO_component : GO:0016021 - integral to membrane [Evidence IDA] GO_function : GO:0005427 - proton-dependent oligopeptide transporter activity [Evidence IDA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006857 - oligopeptide transport [Evidence IDA]; GO:0015031 - protein transport [Evidence IEA] codon_start : 1 note : intestinal peptide transporter PEPT1 product : solute carrier family 15 (oligopeptide transporter), member 1 protein_id : NP_444309.2

name	LOC100043577 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265771 GeneID:100043577
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) protein_id : XP_001480494.1

name	Dock9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486664 GeneID:105445 MGI:106321
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0051020 - GTPase binding [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0017048 - Rho GTPase binding [Evidence IPI]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IDA] codon_start : 1 product : dedicator of cytokinesis 9 protein_id : NP_001074508.1

name	Phgdhl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:90568036 GeneID:68889 MGI:1916139
definition	codon_start : 1 product : phosphoglycerate dehydrogenase like 1 protein_id : NP_081137.2

name	Gpr18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33413406 CCDS:CCDS27342.1 GeneID:110168 MGI:107859
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0045028 - purinergic nucleotide receptor activity, G-protein coupled [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 18 protein_id : NP_877958.1

name	Ebi2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88853593 CCDS:CCDS27343.1 GeneID:321019 MGI:2442034
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0045028 - purinergic nucleotide receptor activity, G-protein coupled [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : Epstein-Barr virus induced gene 2 protein_id : NP_898852.2

name	Timm8a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83627687 GeneID:223262 MGI:3615492
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0042719 - mitochondrial intermembrane space protein transporter complex [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0045039 - protein import into mitochondrial inner membrane [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]; GO:0006626 - protein targeting to mitochondrion [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : translocase of inner mitochondrial membrane 8 homolog a2 protein_id : NP_001032833.1

name	Tm9sf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981522 CCDS:CCDS27345.1 GeneID:68059 MGI:1915309
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : transmembrane 9 superfamily member 2 protein_id : NP_542123.2

name	Clybl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19173728 CCDS:CCDS27346.1 GeneID:69634 MGI:1916884
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0009346 - citrate lyase complex [Evidence IEA] GO_function : GO:0016830 - carbon-carbon lyase activity [Evidence IEA]; GO:0008815 - citrate (pro-3S)-lyase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006725 - aromatic compound metabolism [Evidence IEA]; GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : citrate lyase beta like protein_id : NP_083832.1

name	1700108J01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265882 GeneID:68245 MGI:1915495
definition	codon_start : 1 product : hypothetical protein LOC68245 protein_id : XP_001481108.1

name	EG328479 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244376 GeneID:328479 MGI:3644731
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC328479 protein_id : NP_808485.1

name	Zic5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468975 CCDS:CCDS27348.1 GeneID:65100 MGI:1929518
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0001843 - neural tube closure [Evidence IMP] codon_start : 1 note : odd-paired related product : zinc finger protein of the cerebellum 5 protein_id : NP_075363.1

name	Zic2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112734853 CCDS:CCDS27349.1 GeneID:22772 MGI:106679
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IMP]; GO:0007417 - central nervous system development [Evidence IGI]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IMP]; GO:0001843 - neural tube closure [Evidence IMP]; GO:0048066 - pigmentation during development [Evidence IMP] codon_start : 1 note : Zinc finger protein of the cerebellum 2; kumba; GENA 29; odd-paired homolog; Zic family member 2 (odd-paired homolog, Drosophila) product : Zic finger protein of the cerebellum 2 protein_id : NP_033600.3

name	ENSMUSG00000075465 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265884 GeneID:100038380 MGI:3642026
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481111.1

name	Pcca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450241 CCDS:CCDS27350.1 GeneID:110821 MGI:97499
definition	EC_number : 6.4.1.3 GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004658 - propionyl-CoA carboxylase activity [Evidence IMP] codon_start : 1 exception : mismatches in translation note : propionyl CoA-carboxylase alpha product : propionyl-Coenzyme A carboxylase, alpha polypeptide protein_id : NP_659093.1

name	BC006662 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703924 CCDS:CCDS27351.1 GeneID:223267 MGI:2385008
definition	GO_function : GO:0003674 - molecular_function [Evidence IEA] codon_start : 1 product : hypothetical protein LOC223267 protein_id : NP_663441.1

name	Tmtc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037339 CCDS:CCDS27352.1 GeneID:70551 MGI:1921050
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : transmembrane and tetratricopeptide repeat containing 4 protein_id : NP_082927.1

name	LOC668843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668843
definition	number : 1 pseudo : _no_value

name	LOC668847 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668847
definition	number : 1 pseudo : _no_value

name	LOC621710 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265880 GeneID:621710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 125 ESTs, 29 Proteins product : similar to heterogeneous nuclear ribonucleoprotein A3 pseudo : _no_value transcript_id : XR_034964.1

name	EG432907 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94397369 GeneID:432907 MGI:3645502
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG432907 transcript_id : XR_002315.1

name	4930594M22Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149265370 GeneID:654799 MGI:1925478
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930594M22 gene transcript_id : XR_035095.1

clone name	MSMg01-324L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352P08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-356P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118M21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-373J21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-136L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416A15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-381J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189C24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-118M21.T7 (MSMg01no118_m21.b1)	MSMg01-118M21.TJ (MSMg01no118_m21.g1)
ACC	AG329586	AG329587
length	712	716
length of high quality (start - end)	653 (39 - 691)	300 (72 - 371)
definition	CHROMAT_FILE: MSMg01no118_m21.b1 PHD_FILE: MSMg01no118_m21.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:25:46 2005	CHROMAT_FILE: MSMg01no118_m21.g1 PHD_FILE: MSMg01no118_m21.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:25:46 2005
singlet/doublet	singlet	---
BLAST hit	plural	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCA AGCCCATAGCCTTCTCAAGGAGTTTCTAGGACTGTTGGAACACTGGCGAA GGCTTTAGCTATGTCAGAATTCAATCTTAAAAGGCACTTATAATAGGATA ATACTAAAAGAGAGCGTGTGGATCCATACACTAGACTAACGTGGGAATGG AATATTAATGTGTGGGTTAGAGAGGACACCAGACTCTAGGAGGTGAGTTT CCGTGAAACTCTTTGCCTGAGATGCCTGCAGGCCACAGAGAACCGTGTGG TGTGACTCGCCATGAGGATGGCAGCTGGGGGAGTGAAGCCAACCTCATCC CCAGCAGAGGATGAAGCTGAAGCAGAGGATGACTCACCTGTAGTCAGCCA GGTAGCTGTTAACATTGCTGAGACTGAGACGAGCCTGAGGGCCCTAAAGC AAATGGAGTAGCTTCCAAGCCTCTCGGCCCGTCAAGCTGACTCGACCAGA GTGCGTGGCACACGAGTACTTGTGTGGTGGACCAGAGACAACTCAAAGCC AGAGACAATTCCAGGTCTGGAGAACAAAGGACTTCATGGCCTAAGCTTTC AAAGCGAGAGGCTTGATTCTGAAACTCACCACACTGGGCTTTTTCTTCAC ATTCTCCCTCTTCTAAGGTCAGTTGTCTTCTGGGTCGCTCCATGGTAGCC AGAGCTGATCAA	AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXTTTTAAATGTATAGAAGAGGCTGGAAAGA TGGCTCAGCGTTTTATCTGGACCAGGCAGGGTTCAAGTCCCAGCACCTAC ATGGCAGCTTACAACCATCTCTAACTCCAGGTCCAAGGCATCTGATGCCC TCCTTCTGCCCCAAAACAAGGCATTTGTGTGATGACAGACATTCAGGCAG GTAAAACAACCATATACATAAATAATAATTTAAAGAGAACAAATTACATT CTTATGGTCAGATAAAAAAGGAAAATCATGTTTTGTTGATGTATCTGTTA TCCAGCACAATTTGTATGCATGCGTATTGATACCCATGGAGACCACAAGA TGTAGGATGCTCTACAACTAGAGTTCCAGACACTTGCAAGCCATCATGTG GGTGCTGAGAACTGAGTTTGGGTCCTCTGAAAGAGCAGCATATGCTCTGA ACTACTGAGCCATCTCATTAGCCCCAGAACAACATGTGTTTCTCTGAAAG TGTTTCCAAACTGGGTGTGGTGGGTATTCCTGTAATCCCAACACTTGAGA GGCTGAGGCAGGAGACTTGCCAAGAGTGTGTACCAGGAAGGGCTAAAGTA AGAGCCTATCTCCATCACCTCTACCCAAATATTCAGGCCCTATGCACTTA GGGAATGAATAAAGTC
quality values	Open. Hide. 22 28 29 29 30 21 19 19 17 14 17 10 9 9 19 22 33 33 27 22 10 12 12 22 22 10 8 6 6 6 7 9 16 13 18 19 21 22 24 32 34 34 36 36 36 50 35 35 28 26 26 30 33 33 30 23 16 15 11 11 14 22 33 27 27 31 31 31 31 48 53 53 53 53 53 53 50 50 47 53 53 47 47 47 48 48 53 53 47 47 48 42 36 40 54 57 57 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 50 50 50 50 50 50 57 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 50 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 50 50 50 50 50 50 50 57 68 68 68 68 68 68 68 68 68 57 57 68 57 57 57 57 57 59 57 57 57 57 57 57 57 57 57 68 68 57 57 57 57 57 57 57 57 57 52 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 52 54 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 47 47 47 59 59 68 68 68 68 68 68 68 68 68 68 68 44 44 28 28 27 32 24 16 18 19 30 44 43 43 41 59 43 43 43 59 59 68 68 68 68 68 68 68 57 57 57 57 59 59 59 59 57 57 57 57 57 57 57 57 59 37 37 37 37 37 37 59 59 47 59 43 27 24 23 23 23 36 41 37 39 41 44 47 53 57 57 57 59 43 47 47 39 39 59 59 59 59 59 59 59 59 68 59 59 39 35 35 59 47 48 54 59 59 59 43 43 32 37 28 30 21 34 28 57 57 57 57 57 57 59 59 59 44 59 44 43 54 48 48 54 54 54 68 68 59 59 59 57 57 59 59 59 59 59 54 59 57 59 59 59 57 50 50 50 53 43 43 35 35 32 39 59 59 59 59 59 59 59 59 59 59 59 41 41 41 37 37 39 44 44 47 47 47 47 48 48 59 59 48 48 48 47 47 47 47 59 44 41 37 41 41 44 59 59 59 59 59 50 50 50 48 48 48 47 47 47 47 47 59 41 31 31 37 37 33 33 40 40 40 48 48 48 59 59 47 46 41 41 41 43 41 37 39 37 37 37 37 32 32 31 43 43 47 41 41 37 37 41 43 59 47 47 46 37 37 41 39 39 39 41 37 30 34 28 24 26 28 28 43 37 37 37 37 43 43 43 36 36 47 43 47 39 39 43 43 48 48 59 43 43 43 43 37 43 47 43 43 40 40 40 39 47 43 43 41 41 39 39 37 35 31 31 37 37 37 37 30 29 31 35 37 37 37 41 47 50 59 32 32 20 20 19 27 25 29 30 28 22 23 22 28 41 37 34 32 37 37 24 19 15 27 22 34 33 31 34 41 41 35 29 27 32 30 24 27 30 30 24 25 25 18 18 12 19 11 12 12 17 19 8 8 8 12 17 32 32 32 19 22 10 13 10 10 10	Open. Hide. 7 7 10 6 6 8 8 17 12 10 11 10 19 19 32 30 30 41 41 33 33 33 33 33 43 48 41 41 28 16 10 9 10 10 9 11 11 12 21 21 33 33 33 33 21 21 10 10 12 26 21 53 53 50 39 34 30 18 21 16 19 18 14 12 11 11 21 21 33 33 33 48 48 30 26 10 10 8 22 22 37 37 42 47 47 47 47 53 50 53 47 47 47 47 68 68 68 48 47 41 41 41 50 54 57 57 57 57 57 57 59 68 68 54 68 57 57 43 39 35 28 30 40 30 50 50 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 43 43 43 43 47 47 57 46 48 48 59 59 57 57 48 48 48 48 57 57 54 57 59 59 57 57 48 57 57 57 57 57 57 57 57 57 57 48 48 57 37 41 39 30 30 37 34 30 25 14 14 12 12 12 12 13 18 18 20 22 24 30 43 59 59 59 57 57 57 50 50 50 57 57 57 57 57 59 59 59 59 59 68 68 68 68 59 59 68 68 68 68 57 57 57 57 57 50 50 48 48 46 44 40 43 37 40 28 25 25 36 36 57 46 57 48 48 48 54 59 59 59 47 47 43 43 43 43 41 41 59 59 57 59 59 59 59 43 43 43 59 57 57 57 48 48 48 59 41 41 30 30 30 37 41 47 44 44 44 41 41 41 41 41 41 41 47 50 59 59 59 59 59 59 47 47 47 59 44 41 41 44 59 59 47 47 41 39 37 37 47 47 57 57 57 57 57 59 59 57 57 57 57 43 43 43 43 40 43 43 48 57 57 57 59 48 48 48 48 59 59 59 59 59 59 44 41 41 41 39 39 39 40 39 37 37 32 29 29 37 43 43 37 47 37 41 41 41 41 41 41 31 34 41 43 43 59 47 59 59 59 48 47 47 50 50 42 42 42 42 48 48 48 48 48 41 47 25 25 13 26 24 37 32 32 18 18 20 32 32 30 30 15 15 12 26 26 34 34 25 22 22 21 25 30 37 37 40 39 37 37 32 29 29 30 25 31 31 31 32 32 31 39 19 19 14 14 19 19 29 21 21 15 19 15 19 23 27 33 39 39 34 25 32 23 28 28 28 31 39 41 41 41 31 32 29 27 27 25 30 30 29 21 21 14 14 14 18 21 32 25 25 25 25 22 16 17 11 11 10 12 17 26 24 26 28 31 24 21 18 15 10 10 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no118_m21.b1 MSMg01no118_m21.b1 CHROMAT_FILE:
MSMg01no118_m21.b1 PHD_FILE: MSMg01no118_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:46 2005
         (653 letters)



>mm_chr14_122445930_122446982
          Length = 1053

 Score = 1201 bits (621), Expect = 0.0
 Identities = 642/649 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaagcccatagccttctcaaggagtttctaggactgttggaacactggcgaagg 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaagcccatagtcttctcaaggagtttctaggactgttggaacactggcgaagg 264

                                                                       
Query: 65  ctttagctatgtcagaattcaatcttaaaaggcacttataataggataatactaaaagag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctttagctatgtcagaattcaatcttaaaaggcacttataataggataatactaaaagag 324

                                                                       
Query: 125 agcgtgtggatccatacactagactaacgtgggaatggaatattaatgtgtgggttagag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agcgtgtggatccatacactagactaacgtgggaatggaatattaatgtgtgggttagag 384

                                                                       
Query: 185 aggacaccagactctaggaggtgagtttccgtgaaactctttgcctgagatgcctgcagg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggacaccagactctaggaggtgagtttccgtgaaactctttgcctgagatgcctgcagg 444

                                                                       
Query: 245 ccacagagaaccgtgtggtgtgactcgccatgaggatggcagctgggggagtgaagccaa 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 445 ccacagagaaccgtgtggtgtgactcgccatgaggatggcagctgggggagtgaagccga 504

                                                                       
Query: 305 cctcatccccagcagaggatgaagctgaagcagaggatgactcacctgtagtcagccagg 364
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 505 cctcatccccagcagaggatgaagttgaagcagaggatgactcacctgtagtcagccagg 564

                                                                       
Query: 365 tagctgttaacattgctgagactgagacgagcctgagggccctaaagcaaatggagtagc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tagctgttaacattgctgagactgagacgagcctgagggccctaaagcaaatggagtagc 624

                                                                       
Query: 425 ttccaagcctctcggcccgtcaagctgactcgaccagagtgcgtggcacacgagtacttg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 625 ttccaagcctctcggcccgtcaagctgactcgaccagagtgcgtggcacacgagtgcttg 684

                                                                       
Query: 485 tgtggtggaccagagacaactcaaagccagagacaattccaggtctggagaacaaaggac 544
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgtggtgggccagagacaactcaaagccagagacaattccaggtctggagaacaaaggac 744

                                                                       
Query: 545 ttcatggcctaagctttcaaagcgagaggcttgattctgaaactcaccacactgggcttt 604
           |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 745 ttcatggcctaagctttcaaagcgaggggcttgattccgaaactcaccacactgggcttt 804

                                                            
Query: 605 ttcttcacattctccctcttctaaggtcagttgtcttctgggtcgctcc 653
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttcttcacattctccctcttctaaggtcagttgtcttctgggtcgctcc 853


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space:   670649
Effective search space used:   670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information