CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGAA
TTCTCTGCTTATTCCATGACAAGAAAGAAAAAAATCCACTTGCAAACAGA
AAATGTATTACCTCATAGGTACACCGATTTTAGTTTGAAAGAGAAGGCAT
TTTGAAAAGAATACAATTATTTAGGGGCAAGCATCAAAACACATTGCCAT
GTGTTATAAACTTGACCTGCTGAAGAGTGCAATGTTTCGTGTAACGCCTC
CTGCTCTCTGTTTGCTTTCCTCCTGCACTTGCTAGAATTAAATGGGGTTA
GGAATCATCTGTGTATTCTTCCGTTCGGGAAAAGCATCTAGACATTGTAC
TCAGTAAAAGATCAAGACACACATCAGTGTCTCAATCTCTACTTGCTTGC
TTGGTGTTTATGATATCTTAGTGCACTCTTCGCTGGTCAGCAGCAAGTTT
TCCGTGGGTTTTATGTTAGCGTGGGTCCACTTCTGTTCACCTACCCTATA
AGAAAAATAAAAGTTGTATTCAGATTGAATTCTTCAAAAGGCTACTGTAC
GCTGTTGGTTGTTTGAGTTAGGCATTTTATATGAAAGTTACACTTTTTGT
AGTTGTTTTGGACGATTGGCTAAAGTTCTGGCTTCTTTATTTGCTTCTGG
AATACATCCAAAGTTTTATTTGTAAGCCCATCTGCAGATTATTTTGA

CGATGAAGTGGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTTAGGGATTAAAGCTGTGTACTAAG
GGTATGCCTGCATTCCAGCCAGATCATACAGACCCTAAAGGTCTTTGGAT
GTGATCAGACCAGCCATGTTGGTGGATTAAAATCCCTTTATAAATGACAT
AATGAAATTTGAAGGAAAATGGATGTAACTAAAAAAGATTGTCCTGAGTG
AGTTAACCCAGACCAAAAAGACAAACATTGCAGTAGTTTGAATATTCTTG
GCCCATTGAGTGACACTATCTGGAGGTATGGCCTTGTTAGAGTAGGTGTG
ACCTTGTTTGAAGAAGGGTGTCACTGCAGAAGTGGGCAATGTTATGCTCC
TCCTAGCTGCCTGACAGCCATTCTTCTCCTGTCTACCTTTGTATAATGAT
GTAGAGTTCTCAGATTCTCTAGCACCATGGCTGTGTGGTGGCACCATGCT
CCCACCTTGATGATAGTGGACCAGACTCCTGAATCTATGACAGCCTCAAT
TTAAAAAGTTCTGTTGGTCATGGTGTTTCTTCCCAGCAGTAAAATGCTAA
GACATATGTACTCACTTATAAGTTAATATTATTCATAAAAGCCCAGGATA
ACCATGTTACAAATCATAGATTCGAAGATACTATATAACATGGAGGG

Query= MSMg01no118_o16.b1 MSMg01no118_o16.b1 CHROMAT_FILE:
MSMg01no118_o16.b1 PHD_FILE: MSMg01no118_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:54 2005
         (586 letters)



>mm_chr14_88865507_88866494
          Length = 988

 Score = 1067 bits (552), Expect = 0.0
 Identities = 579/588 (98%), Gaps = 2/588 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   acaagaaagaaaa-aaatccacttgcaaacagaaaatgtattacctcataggtacaccga 59
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 acaagaaagaaaagaaatccacttgcaaacagaaaatgtattacctcataggtacaccga 729

                                                                       
Query: 60  ttttagtttgaaagagaaggcattttgaaaagaa-tacaattatttaggggcaagcatca 118
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 728 ttttagtttgaaagagaaggcattttgaaaagaagtacaattatttaggggcaagcatca 669

                                                                       
Query: 119 aaacacattgccatgtgttataaacttgacctgctgaagagtgcaatgtttcgtgtaacg 178
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 668 aaacacattgccatgtgttataaacttgacctgctgaagagtgcgatgtttcgtgtaacg 609

                                                                       
Query: 179 cctcctgctctctgtttgctttcctcctgcacttgctagaattaaatggggttaggaatc 238
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 608 cctcctgctctctgtttgctttcctcctgcacttgctagaattaaatggggttaggaacc 549

                                                                       
Query: 239 atctgtgtattcttccgttcgggaaaagcatctagacattgtactcagtaaaagatcaag 298
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 548 atctgtgtattcttccgttcgtgaaaagcatctagacattgtactcagtaaaagatcaag 489

                                                                       
Query: 299 acacacatcagtgtctcaatctctacttgcttgcttggtgtttatgatatcttagtgcac 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 acacacatcagtgtctcaatctctacttgcttgcttggtgtttatgatatcttagtgcac 429

                                                                       
Query: 359 tcttcgctggtcagcagcaagttttccgtgggttttatgttagcgtgggtccacttctgt 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tcttcgctggtcagcagcaagttttccgtgggttttatgttagcgtgggtccacttctgt 369

                                                                       
Query: 419 tcacctaccctataagaaaaataaaagttgtattcagattgaattcttcaaaaggctact 478
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tcatctaccctataagaaaaataaaagttgtattcagattgaattcttcaaaaggctact 309

                                                                       
Query: 479 gtacgctgttggttgtttgagttaggcattttatatgaaagttacactttttgtagttgt 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gtacgctgttggttgtttgagttaggcattttatatgaaagttacactttttgtagttgt 249

                                                           
Query: 539 tttggacgattggctaaagttctggcttctttatttgcttctggaata 586
           ||||||||||| |||||||||||||||||  |||||||||||||||||
Sbjct: 248 tttggacgattagctaaagttctggcttccctatttgcttctggaata 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 988
Length adjustment: 10
Effective length of query: 576
Effective length of database: 978
Effective search space:   563328
Effective search space used:   563328
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)