Query= MSMg01no119_b08.b1 MSMg01no119_b08.b1 CHROMAT_FILE:
MSMg01no119_b08.b1 PHD_FILE: MSMg01no119_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:07 2005
(624 letters)
>mm_chr14_67774987_67776010
Length = 1024
Score = 1129 bits (584), Expect = 0.0
Identities = 611/620 (98%)
Strand = Plus / Plus
Query: 5 gaattcctaggggagacaacggtctatttaacaaacaccacacctcgctgggctcgcttg 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctaggggagagaacggtctatttaacaaacaccacacctcgctgggctcgcttg 264
Query: 65 aatgtgaaaaaatagcactgtaggtccatgtggccagaggcaaagtgtgagtcagccaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatgtgaaaaaatagcactgtaggtccatgtggccagaggcaaagtgtgagtcagccaca 324
Query: 125 gctcgctggctctgcagaagaaatgaacagagttctgactataagaaaactctgtaagag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctcgctggctctgcagaagaaatgaacagagttctgactataagaaaactctgtaagag 384
Query: 185 tttggaagagggggtatttcaatctgtctgggtgcaacaaaatatatgaactgtgccgta 244
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 385 tttggaagagggggtatttcaatctgtctgggtgcaacaaaatacatgaactgtggcgta 444
Query: 245 gacacagtggaaatccatgactcatggttcccgatgctttagagctcaaggttggcatct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gacacagtggaaatccatgactcatggttcccgatgctttagagctcaaggttggcatct 504
Query: 305 ggtgagggcctgtgtcgttgtcaacagatggcacctctccctgaggggccagctagctcc 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 505 ggtgagggcctgtgtcgttgtcaacagatggcacctctccctgaggggccagctagcttc 564
Query: 365 atgacgttctcacaataacactgattccaaactcggtaagtggctctgttctcatgatct 424
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 565 atgacgttctcacaataacactgattccaaacttggtaagtggctctgttctcatgatct 624
Query: 425 ggtcattctttaagtgtccatacctctgaataccatcgttctgtaggttatgattttgct 484
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 625 ggtcattctttaagtgtccatatctctgaataccatcgttctgtaggttatggttttgct 684
Query: 485 atgatttttagggggttgcagacattcagactgtcagtggtggcccagggacagcttagc 544
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atgaattttagggggttgcagacattcagactgtcagtggtggcccagggacagcttagc 744
Query: 545 acagccactagcagcttgagttggtccctcccaacttagagacctcaaattgtggtgaag 604
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 745 acagccactagcagcttgagttggtccctcccaacttagagacctcaaattggggtgaag 804
Query: 605 caggatcttggacttcatca 624
||||||||||||||||||||
Sbjct: 805 caggatcttggacttcatca 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_b08.g1 MSMg01no119_b08.g1 CHROMAT_FILE:
MSMg01no119_b08.g1 PHD_FILE: MSMg01no119_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:07 2005
(437 letters)
>mm_chr14_67846643_67847479
Length = 837
Score = 733 bits (379), Expect = 0.0
Identities = 430/461 (93%), Gaps = 24/461 (5%)
Strand = Plus / Minus
Query: 1 tatcgaggaaagtgctttggaacctgtatcttacctgcaggtggcagaggtcccagaagg 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 751 tatcgaggaaagtgctttggaacctgtattttacctgcaggtggcagaggtcccagaagg 692
Query: 61 caaccatgaagtggcatctcccaaggaggaaatccgccggttttgatgcactgtccagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 caaccatgaagtggcatctcccaaggaggaaatccgccggttttgatgcactgtccagtc 632
Query: 121 aacaatggcaagttgtatgcacaccaggaggggtacactgaggacctggaggtccagctg 180
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 631 aacaatggcaagttgtatgcagaccaggaggggtacactgaggacctgaaggtccagctg 572
Query: 181 gggataagggtgagagttccctggagaattgcaggaatg--------gttctggaatggc 232
||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 571 gggataagggtgagagttccctggagaattgcaggaatggtgaaggagttctggaatggc 512
Query: 233 cctccagttctgtgacccggggaagttagggacaaataccggtcaattagtggttcttgc 292
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 cctcctgttctgtgacccggggaagttagggacaaataccggtcaattagtggttcttgc 452
Query: 293 agaggtctgggacaaagcaccgcccttgtt-------------ctaaggctgggtctcct 339
||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 451 agaggtctgggacaaagcaccacccttgttctcctgaagctacctaaggctgggtctcct 392
Query: 340 gagacaggagctccgggatctgcaacaacaccttccacgatccatgttaaatgaggctgc 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gagacaggagctccgggatctgcaacaacaccttccacgatccatgttaaatgaggctgc 332
Query: 400 agag---aggttttccaaatccaagcagagcgagcttgggg 437
|||| |||||||||||| |||||||||| ||||||||||
Sbjct: 331 agagagaaggttttccaaacccaagcagagtgagcttgggg 291
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
