Query= MSMg01no120_b01.b1 MSMg01no120_b01.b1 CHROMAT_FILE:
MSMg01no120_b01.b1 PHD_FILE: MSMg01no120_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:23 2005
(249 letters)
>mm_chr14_105896995_105897643
Length = 649
Score = 456 bits (236), Expect = e-133
Identities = 248/256 (96%), Gaps = 7/256 (2%)
Strand = Plus / Plus
Query: 1 ctaccatgggaagaaaacagacaaaattaaattaaccctcgggactccatgctctcgggg 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ctaccatgggaagaaaacagataaaattaaattaaccctcgggactccatgctctcgggg 253
Query: 61 ggg-------tttcttgggaccttgcaaaaaggatggagcatatggtaggaagtacccct 113
||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ggggggggggtttcttgggaccttgcaaaaaggatggagcatatggtaggaagtacccct 313
Query: 114 gtgacaacatgggctcaaatgaaatttcaaggatcataaatcctcctgtttcttctcata 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gtgacaacatgggctcaaatgaaatttcaaggatcataaatcctcctgtttcttctcata 373
Query: 174 atttgatgaacagctggtaccaggaagtataacattcctcgagttatattcgtgcctgca 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 atttgatgaacagctggtaccaggaagtataacattcctcgagttatattcgtgcctgca 433
Query: 234 tttctttttttaaaag 249
||||||||||||||||
Sbjct: 434 tttctttttttaaaag 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no120_b01.g1 MSMg01no120_b01.g1 CHROMAT_FILE:
MSMg01no120_b01.g1 PHD_FILE: MSMg01no120_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:23 2005
(298 letters)
>mm_chr14_106044498_106045195
Length = 698
Score = 559 bits (289), Expect = e-164
Identities = 295/297 (99%)
Strand = Plus / Minus
Query: 1 tggccctttgcaactcttactgcgagttgcttcactctgcgacatacttacataagatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tggccctttgcaactcttactgcgagttgcttcactctgcgacatacttacataagatcc 246
Query: 61 aaattacccactgttttctagaatatgtaggaacattctagaaatactctagaaccagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aaattacccactgttttctagaatatgtaggaacattctagaaatactctagaaccagat 186
Query: 121 tgtctagctcacaccagacataccatgtattagctgtgcaactgacaacttccttggttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tgtctagctcacaccagacataccatgtattagctgtgcaactgacaacttccttggttt 126
Query: 181 tttggctccacatgtaaagtgaattaaaatagtgtttacttcattgatttgtttgagaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tttggctccacatgtaaagtgaattaaaatagtgtttacttcattgatttgtttgagaat 66
Query: 241 tgagtttttgaatatggacaaaatgctaaaatgacacatggtatattatgtgcaccc 297
|||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 65 tgagtttttgaaaatggacaaaatgctaaaatgacacatggtatattatgtgtaccc 9
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
