Query= MSMg01no120_d09.b1 MSMg01no120_d09.b1 CHROMAT_FILE:
MSMg01no120_d09.b1 PHD_FILE: MSMg01no120_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:34 2005
(492 letters)
>mm_chr14_103950422_103951313
Length = 892
Score = 882 bits (456), Expect = 0.0
Identities = 483/492 (98%)
Strand = Plus / Plus
Query: 1 taataatccttactgggcaactaacagtgccttacctttaaacagctgctatagcctatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taataatccttactgggcaactaacagtgccttacctttaaacagctgctatagcctatt 260
Query: 61 cattaaatacgtggagtcatcttgtaatcctttgcagcatcgagcaaatgtatccatagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattaaatacgtggagtcatcttgtaatcctttgcagcatcgagcaaatgtatccatagt 320
Query: 121 tatttattaatagacatgcccatccttgattctgatccctactgtgtgtaaaacaattca 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatttattaatagacatgtccatccttgattctgatccctactgtgtgtaaaacaattca 380
Query: 181 tttcctcagcttgttactgccatgtgactttgtagttaactgagccttgttctatgtgct 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcctcagcttgttaccgccatgtgactttgtagttaactgagccttgttctatgtgct 440
Query: 241 tatattttgaggactgactagatatctccctcccaccctactttccttctgtctgtctca 300
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagagtttgaggactgactagatatctccctcccaccctactttccttctgtctgtctca 500
Query: 301 ttccagcacagctgttgatctctgtctatgtgtatgaaagcacttgggtagactccagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttccagcacagctgttgatctctgtctatgtgtatgaaagcacttgggtagactccagag 560
Query: 361 atacactggtgttgggtccaatctctacttcaggagactcaaaagccatctatcactaat 420
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atacactggtgtcaggtccaatctctacttcaggagactcaaaagccatctatcactaat 620
Query: 421 catatctttatatttttatttattttttaagtttctccaccccattttactgtcatataa 480
|||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 621 catatctttatagttttgtttattttttaagtttctccaccccgttttactgtcatataa 680
Query: 481 ttcctttgcaag 492
||||||||||||
Sbjct: 681 ttcctttgcaag 692
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no120_d09.g1 MSMg01no120_d09.g1 CHROMAT_FILE:
MSMg01no120_d09.g1 PHD_FILE: MSMg01no120_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:35 2005
(241 letters)
>mm_chr14_104031974_104032615
Length = 642
Score = 433 bits (224), Expect = e-126
Identities = 236/240 (98%), Gaps = 1/240 (0%)
Strand = Plus / Minus
Query: 1 ttttaatcccagaacttggaaggcatacataaacagggagatctttgggagttcaaggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttttaatcccagaacttggaaggcatacataaacagggagatctttgggagttcaaggcc 506
Query: 61 atcctggtagatacagagagtcagtggcaaaccagagatttacagagagaccctgtctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atcctggtagatacagagagtcagtggcaaaccagagatttacagagagaccctgtctta 446
Query: 121 agagagagaaaagcaagcaagaaaaacttagctcatccaaagacttcccccaccctcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agagagagaaaagcaagcaagaaaaacttagctcatccaaagacttcccccaccctcacc 386
Query: 181 ccaggagacagcaaatgaagtaacaacaacaaaaaaaaaa-ggtggaaaattattcagca 239
|||||||||||||| ||||||||||| || |||||||||| |||||||||||||||||||
Sbjct: 385 ccaggagacagcaagtgaagtaacaaaaaaaaaaaaaaaaaggtggaaaattattcagca 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 642
Length adjustment: 9
Effective length of query: 232
Effective length of database: 633
Effective search space: 146856
Effective search space used: 146856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
