Query= MSMg01no123_e19.b1 MSMg01no123_e19.b1 CHROMAT_FILE:
MSMg01no123_e19.b1 PHD_FILE: MSMg01no123_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:51 2005
(370 letters)
>mm_chr14_105215127_105215896
Length = 770
Score = 661 bits (342), Expect = 0.0
Identities = 364/372 (97%), Gaps = 4/372 (1%)
Strand = Plus / Minus
Query: 1 tttttcttgggctgtttttattttagttaccttta-aaa-atgttgcccatctatttcct 58
||||||||||||| ||||||||||||||| ||| ||| ||||||||||||||||||||
Sbjct: 570 tttttcttgggctctttttattttagtta--attagaaagatgttgcccatctatttcct 513
Query: 59 aatactttagttggtattttataaaaatggtaattttacgcattcatcacataggtatca 118
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 512 aatactttagttggtattttataaaaatggtaattttacgcattcatcacatagttatca 453
Query: 119 agaacaggaggctaagattgggacagattttaccaattaactggatttcttaaggaagaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 agaacaggaggctaagattgggacagattttaccaattaactggatttcttaaggaagaa 393
Query: 179 atcccctggtcctgagctgagcttgaccatcaggtctctttggtcctttaaaacctggga 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 atcccctggtcctgagctgagcttgaccatcaggtctctttggtcctttaaaacctggga 333
Query: 239 caggttttaggtttttgtttgcattttgtgatactgactttgcagttttcagcataagca 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 caggttttaggtttttgtttgcattttgtgatactgactttgcagttttcagcataagca 273
Query: 299 aaattttgtggaatatacatcattctgggttatcctaacttttcttcacaagctttcaca 358
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaattttgtggaatatacctcattctgggttatcctaacttttcttcacaagctttcaca 213
Query: 359 tgacccacgggt 370
||||||||||||
Sbjct: 212 tgacccacgggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no123_e19.g1 MSMg01no123_e19.g1 CHROMAT_FILE:
MSMg01no123_e19.g1 PHD_FILE: MSMg01no123_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:51 2005
(307 letters)
>mm_chr14_105141307_105142013
Length = 707
Score = 563 bits (291), Expect = e-165
Identities = 303/307 (98%)
Strand = Plus / Plus
Query: 1 aaaaaaaaaatgaaactcaaaatgaagagacaaacaaaacttaatatgataaaaacacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaaaaaaaatgaaactcaaaatgaagagacaaacaaaacttaatatgataaaaacacca 260
Query: 61 aaaaacaaaaacaaaatccccaaaaacccaaaccctaaactaaactaaaagcacacaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaacaaaaacaaaatccccaaaaacccaaaccctaaactaaactaaaagcacacaaaa 320
Query: 121 taccatgaatttgtgttgctttggccagcgggtcctgggcatggggtctgctgcaaactg 180
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taccatggagttgtgttgctttggccagcgggtcctgggcatggggtctgctgcaaactg 380
Query: 181 tctcctgtgccttttaaaacataactctaccatgaaaattttcaaacctaggtgaaaatt 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 381 tctcctgtgccttttaaaacataactctaccatgaaaattttcaaagctaggtgaaattt 440
Query: 241 ttcaatagttttactggacttgctttatctacatacactcctagacattaattttccagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcaatagttttactggacttgctttatctacatacactcctagacattaattttccagg 500
Query: 301 ctttata 307
|||||||
Sbjct: 501 ctttata 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 707
Length adjustment: 9
Effective length of query: 298
Effective length of database: 698
Effective search space: 208004
Effective search space used: 208004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
