Query= MSMg01no126_a01.b1 MSMg01no126_a01.b1 CHROMAT_FILE:
MSMg01no126_a01.b1 PHD_FILE: MSMg01no126_a01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:13 2005
(468 letters)
>mm_chr14_71765360_71766226
Length = 867
Score = 808 bits (418), Expect = 0.0
Identities = 451/462 (97%), Gaps = 3/462 (0%)
Strand = Plus / Minus
Query: 8 ggaattcctcaagacttaactttaactccattcctttgtccat-cctctctcctagaacc 66
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 667 ggaattcctcaagacttaactttaactccattcctttgtccatacc-ctctcctagaacc 609
Query: 67 aagtgaatagatgtccttcaattgaattctcatatctttacatacagctacctgttgccg 126
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aagtgaatagatgtccttcaattgaattctcatatctttacatacagctacctgttgcct 549
Query: 127 cttacctaccttccccagaccattgccaactgagacactgtcctctctccgagtcttgtt 186
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ctta-ctaccttccccagaccattgccaactgagacactgtcctctctccgagtcttgtt 490
Query: 187 tagcattctccaacctcaatttcttgttttgttcttgaaatgcctggctcatattgtcct 246
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 489 tagcattctccaacctcaatttcttgttttgttcttgaaatacctggctcatattgtcct 430
Query: 247 tcatttatcctcacccatcattctattaatttcagatgcaaattttaaccaattttttcc 306
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tcatttatcttcacccatcagtctattaatttcagatgcaaattttaaccaattttttcc 370
Query: 307 ttatttatttcctccagttacatatgatctatcacaagctccatccattcttcaaaatcc 366
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 369 ttatttatttcctccagttacatatgatatatcacaagctccatccattcttcaaaatcc 310
Query: 367 cagttgtgggtctgtgtggtcagatagtgatggctatggcaaagtgcctgagataaatat 426
||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||
Sbjct: 309 cagttgtgggtctgtgtggtcagatagcgatggctaaggcaaaatgcctgagataaatat 250
Query: 427 gacaaatgttttaaatcttgatcatgatttcagattcttcag 468
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gacaaatgttttaaatcttgatcatgatttcagattcttcag 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 867
Length adjustment: 10
Effective length of query: 458
Effective length of database: 857
Effective search space: 392506
Effective search space used: 392506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_a01.g1 MSMg01no126_a01.g1 CHROMAT_FILE:
MSMg01no126_a01.g1 PHD_FILE: MSMg01no126_a01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:13 2005
(285 letters)
>mm_chr14_71615820_71616504
Length = 685
Score = 493 bits (255), Expect = e-144
Identities = 261/263 (99%)
Strand = Plus / Plus
Query: 1 cttcttcccatcctcctccacaggttccatttggatatgggacagtctgtggttatttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcttcccatcctcctccacaggttccatttggatatgggacagtctgtggttatttac 260
Query: 61 caacattttatcaggagtacaggttaccagactccctgagggagggatgcagcagctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caacattttatcaggagtacaggttaccagactccctgagggagggatgcagcagctggg 320
Query: 121 ggtttaagaattatttctggaaaataaaagccattgagaaattcctcaggggatggcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtttaagaattatttctggaaaataaaagccattgagaaattcctcaggggatggcaag 380
Query: 181 atgtcctctgccaactaatggagcagaggggacactggttccttgtgtgtgtgtgtttgt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 atgtcctctgccaactaatggagcagaggggacactggttccttgtgtgtgtgtgtgtgt 440
Query: 241 gtttgtgtgtgtgtgtgtgtgtg 263
|| ||||||||||||||||||||
Sbjct: 441 gtgtgtgtgtgtgtgtgtgtgtg 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
