Query= MSMg01no128_o03.b1 MSMg01no128_o03.b1 CHROMAT_FILE:
MSMg01no128_o03.b1 PHD_FILE: MSMg01no128_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:07 2005
(646 letters)
>mm_chr14_12859343_12860388
Length = 1046
Score = 1160 bits (600), Expect = 0.0
Identities = 633/644 (98%), Gaps = 2/644 (0%)
Strand = Plus / Minus
Query: 4 ggaattcactctgtagcctttatgaagttttgacttggagttaagcaaaagtgtggaaag 63
|||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 846 ggaattcactctgtaggttttatgaagttttgacttggagttaaacaaaagtgtggaaag 787
Query: 64 gtgtgaggtagattctgcactgcacattcggaactgtatcatgctctaaccccttatcac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 gtgtgaggtagattctgcactgcacattcggaactgtatcatgctctaaccccttatcac 727
Query: 124 ccccttaggggaggtggccataagctgcagccctccacttaaccctgtgtgacacaggaa 183
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ccccttaggggagctggccataagctgcagccctccacttaaccctgtgtgacacaggaa 667
Query: 184 gtacgtacccaagggtacgctatggaaggagcccagcgcctctccacagggaatcaggga 243
||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 666 gtatgtacccaagggtacgctatggaaggagcccagcgccactccacagggaatcaggga 607
Query: 244 atagcagataaggtcagcggagtgaggcgcctgctcacgagtcttacacactggaagcca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 atagcagataaggtcagcggagtgaggcgcctgctcacgagtcttacacactggaagcca 547
Query: 304 cagctgtccacagctttaactgtagttaaagggaaggaggagagaaaatgcaaagaactc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 cagctgtccacagctttaactgtagttaaagggaaggaggagagaaaatgcaaagaactc 487
Query: 364 tgtgatccaacatccaaggacgtaacagatagatacacggagacaggttcactgcagcca 423
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 486 tgtgatccaacatccaaggacgtaacagatagatacac-gagacaggttcactgcagcca 428
Query: 424 caggcaagaagagccacacacaccctgtccatagaaagagggcgcagagggaagaaaacc 483
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cagtcaagaagagccacacacaccctgtccatagaaagagggcgcagagggaagaaaacc 368
Query: 484 ccactctgcagc-tacaggcagcacagtggctccccctagggcagagcctccaagaggcc 542
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ccactctgcagcttacaggcagcacagtggctccccctagggcagagcctccaagaggcc 308
Query: 543 catgggaagttgaattctctctctggcctgagcagcagtcgccagaggacctcagctgca 602
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 307 catgggaagttgaattctctctctggcctgagcagcagtcatcagaggacctcagctgca 248
Query: 603 tgtgaatttgtggatttggtatggactttcctccttgtatacga 646
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tgtgaatttgtggatttggtatggactttcctccttgtatacga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_o03.g1 MSMg01no128_o03.g1 CHROMAT_FILE:
MSMg01no128_o03.g1 PHD_FILE: MSMg01no128_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:07 2005
(588 letters)
>mm_chr14_12788189_12789175
Length = 987
Score = 1021 bits (528), Expect = 0.0
Identities = 573/588 (97%), Gaps = 1/588 (0%)
Strand = Plus / Plus
Query: 1 actaggatgattggaagggttgcagtatcaaagtgacagctactgcctgctatgtgacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actaggatgattggaagggttgcagtatcaaagtgacagctactgcctgctatgtgacag 260
Query: 61 aacatatagtaattttcttgagcttgtaaaagtttcagcatatagtgttatagaaacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacatatagtaattttcttgagcttgtaaaagtttcagcatatagtgttatagaaacttt 320
Query: 121 ggcacagaaaccaacttgtagtctttgaacatggttaacctaggttctttaaaatctgtt 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 ggcacagaaaccaacttgtagtctttgaacatggtaaacctaggttctttaaaatctgtt 380
Query: 181 catgttgaaattaattccacagatttaataatgtgtggaagaaatacacagccatagagg 240
||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 catgttgtatttaattccacagatttaataatgtgtggaagaaatacacagccagagagg 440
Query: 241 ggtctgtttggatcatctcaattcatacaattcatatgaatccagtacatgtcagatcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 ggtctgtttggatcatctcaattcatacaattcatatgaatccagtacatgtcagataag 500
Query: 301 aggcctctatagcttcttaacatgagacactaacttccagtgactcatactgagatgtaa 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 aggcctctatagcttcttaacatgagacactaatttccagtgactcatactgagatgtaa 560
Query: 361 cctggagcactcaaggaatttggggatatattttgagtacatgttgtgagtttcgagata 420
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 561 cctggagcactcaaggaatttgggggtatattttgagtacatgttgtgagtttcgaaata 620
Query: 421 ttgttttggggaatgtagggaaaggaatcgtattatctttacatatttcttaaaactaga 480
||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 621 ttgttttgggggatgtagggaaaggaggcgtgttatctttacatatttcttaaaactaga 680
Query: 481 tgtgcacgcataattatcagaaaaagttataagccacgcggtctatccttgctgtagcca 540
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 681 tgtgcacg-ataattatcagaaaaagttataagccatgcggtctatccttgctgtagcca 739
Query: 541 tatctgtctttcatacctagataatgaatacaatcttaactttcttaa 588
|||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 740 tatctgtctttcatacctagataatgaaaacaatcttaactttcttaa 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 987
Length adjustment: 10
Effective length of query: 578
Effective length of database: 977
Effective search space: 564706
Effective search space used: 564706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
