CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATGTGAAACTGACATGTTGCATAAAATCACATTACATATGTGTAT
ACACAATGTGTATGTGTGTGTGTGTGTATTAATGTAAACTGAGAAGTTAA
AAAAAGATTAAAATAATCATTCTGTATTTGATATGTTTTCTAGAAATAGG
AATAATTTTGAATACCATGTTATCCTTATTTTGAGAGTATGAACTTAAGT
AGCAATAGTGACTGTTATCAAATCCTTTCCTACAGAAATAACATTGTCAG
TAATATATAAATGAAATCATGGTAGCTAGTATACTGAAAGTATTGAAAAG
AAAAGCATTTCCTCGCACATGAGGAGAAATAAAAGTTTATTTCCAACACG
TTCATACAGAGTGCAGCATTGTAGCCAGTGGTGGGCTTTCTAATCCCATG
TTCCTGAATCTTGCATAAAATCCCAAGTGGATCTCCCACTAGAACAAGTT
TTCAGTTTGAAAGTTTTACACATGTCTATGAATAAAATATTTTTTGCTTT
GTAACATTTACTTGCATAGCAAAGTCAACTTTAGTTACTGATATGTATTT
TACTTAACAACCTATTGACATTTTTTTTTCTGTACAGCCAATGATAAAAA
CCAGCGAATACAATCAGAGCTTTGTTATTTGTTTTGTTGAAAGAGGAGAG
ATAGTGTCATCAAATAAGAGAGAAAAGGACGCTTACACTGAATGTGA

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTACCCCATTTTTA
ATGGGGTTATTTTAATTTCTGGAGTCCAGCTTGCTTGCTTGCTTGCTTGC
TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT
TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC
TTTCTTTCTTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCTTTCCCCTTCCCCTTCCTC
TTCCTCTTCCTCTTCCTGTTCTTCTTTCTTCTTCTTTCTTCTTCTTTTTG
ACAGGGTTTCTCTGTATAACTCTGGCTCTCTTAGAACTCACTCTGTAAAC
CAGGCTGGCCTGGAAGTCAGAAATCTGCATGCCTCTGCCTCCCACGTGCT
GGGATTAAAGGTGTGTGCCACCACCACCTGGTTATCAGATCTAGTATTGA
TAAAAATCCTTTCCCAGTCTGTTGGTGGCCTTTTTGTCTTATTAACTATC
TTTTGCCTTACAGAAGCATTTAATCTAGAATTCATTAGTCTCCAATTAGA
ATGAAATTTACTATTTTTAGGTCAACAAAGAATTTACTTAATAATACACA
TTTTCAAGAGCAATTTGGCATATATCTTTACAATAAATGAAATT

Query= MSMg01no129_a21.b1 MSMg01no129_a21.b1 CHROMAT_FILE:
MSMg01no129_a21.b1 PHD_FILE: MSMg01no129_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:21 2005
         (652 letters)



>mm_chr14_110638111_110639161
          Length = 1051

 Score = 1222 bits (632), Expect = 0.0
 Identities = 644/648 (99%), Gaps = 1/648 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatgtgaaactgacatgttgcataaaatcacattacatatgtgtatacacaatgt 64
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gaattcatgtgaaactgagatgttgcataaaatcacattacatatgtgtatacacaatgt 792

                                                                       
Query: 65  gtatgtgtgtgtgtgtgtattaatgtaaactgagaagttaaaaaaagattaaaataatca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 gtatgtgtgtgtgtgtgtattaatgtaaactgagaagttaaaaaaagattaaaataatca 732

                                                                       
Query: 125 ttctgtatttgatatgttttctagaaataggaataattttgaataccatgttatccttat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ttctgtatttgatatgttttctagaaataggaataattttgaataccatgttatccttat 672

                                                                       
Query: 185 tttgagagtatgaacttaagtagcaatagtgactgttatcaaatcctttcctacagaaat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tttgagagtatgaacttaagtagcaatagtgactgttatcaaatcctttcctacagaaat 612

                                                                       
Query: 245 aacattgtcagtaatatataaatgaaatcatggtagctagtatactgaaagtattgaaaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 aacattgtcagtaatatataaatgaaatcatggtagctagtatactgaaagtattgaaaa 552

                                                                       
Query: 305 gaaaagcatttcctcgcacatgaggagaaataaaagtttatttccaacacgttcatacag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gaaaagcatttcctcgcacatgaggagaaataaaagtttatttccaacacgttcatacag 492

                                                                       
Query: 365 agtgcagcattgtagccagtggtgggctttctaatcccatgttcctgaatcttgcataaa 424
           | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 attgcagcattgta-ccagtggtgggctttctaatcccatgttcctgaatcttgcataaa 433

                                                                       
Query: 425 atcccaagtggatctcccactagaacaagttttcagtttgaaagttttacacatgtctat 484
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 432 atcccaagtggatctcccactagaacaagtttttagtttgaaagttttacacatgtctat 373

                                                                       
Query: 485 gaataaaatattttttgctttgtaacatttacttgcatagcaaagtcaactttagttact 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gaataaaatattttttgctttgtaacatttacttgcatagcaaagtcaactttagttact 313

                                                                       
Query: 545 gatatgtattttacttaacaacctattgacatttttttttctgtacagccaatgataaaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gatatgtattttacttaacaacctattgacatttttttttctgtacagccaatgataaaa 253

                                                           
Query: 605 accagcgaatacaatcagagctttgttatttgttttgttgaaagagga 652
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 accagcgaatacaatcagagctttgttatttgttttgttgaaagagga 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1051
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1041
Effective search space:   668322
Effective search space used:   668322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)