Query= MSMg01no130_h21.b1 MSMg01no130_h21.b1 CHROMAT_FILE:
MSMg01no130_h21.b1 PHD_FILE: MSMg01no130_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:18 2005
(479 letters)
>mm_chr14_81723456_81724339
Length = 884
Score = 828 bits (428), Expect = 0.0
Identities = 468/484 (96%), Gaps = 5/484 (1%)
Strand = Plus / Minus
Query: 1 acacaaggcataatcctttatattatttgtcacagggatgatcacaaataaacttcctgt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 684 acacaaggcataatcctttatattatttgtcacagggatgatcacagataaacttcctgt 625
Query: 61 tttaatttgttgtgctgcatatagaagacatcagaaaaggacaattagggacgcttcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tttaatttgttgtgctgcatatagaagacatcagaaaaggacaattagggacgcttcttt 565
Query: 121 ccaaagaagtagccaaggaatatctgaagaagttaattagctggatgagtgttagaaaat 180
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccaaagcagtagccaaggcatatctgaagaagttaattagctggatgagtgttagaaaat 505
Query: 181 gtaagatagatatttctaaatttatatgattgtgaatgctgacttaaaattcattgaaat 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtaaggtagatatttctaaatttatatgattgtgaatgctgacttaaaattcattgaaat 445
Query: 241 aagaatttccatttatgtgtctttgtgcttgttcatgatctctgaagcttcatatgataa 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 444 aagaatttccatttatgtgtctttgtgcttgttcatgatctctgaagcctcatatgataa 385
Query: 301 catctacttgtgatccaactggtgtcaagaaaatcatgatatagtcatgtgaatgttagc 360
|||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 384 tatctacatatgatccaactggtgtcaagaaaatcatgatatagtcatgtgaatattagc 325
Query: 361 acttccaaagaaaaggacaacatagaccaggttctggagagcattaacaaagagatgcag 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 324 acttccaaagaaaaggacaacatagaccaggttctggagagcattaataaagagatgcag 265
Query: 421 agaataccataaatccaaaactgatagatg-----aaaaaaaaaacaattaaagaattta 475
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 264 agaataccagaaatccaaaactgatagatgaaaaaaaaaaaaaaacaattaaagaattta 205
Query: 476 tttg 479
||||
Sbjct: 204 tttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 884
Length adjustment: 10
Effective length of query: 469
Effective length of database: 874
Effective search space: 409906
Effective search space used: 409906
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_h21.g1 MSMg01no130_h21.g1 CHROMAT_FILE:
MSMg01no130_h21.g1 PHD_FILE: MSMg01no130_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:18 2005
(637 letters)
>mm_chr14_81673789_81674825
Length = 1037
Score = 1178 bits (609), Expect = 0.0
Identities = 627/633 (99%)
Strand = Plus / Plus
Query: 5 ctagtagaaatattcgaagaacaccaacaaaacattttaaaggtctttgtaagtaagtaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctagtagaaatattcaaagaacaccaacaaaacattttaaaggtctttgtaagtaagtaa 264
Query: 65 gatgtccattctggttttaatattcaatgtcaattgtacagaaaattgtaattaagtgtt 124
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 gatgtccattctggttttaatattcaatgtcaattgtatagaaaattgtaattaagtgtt 324
Query: 125 tgatatcatgcagtttgtcccataccatttacctatagaaagtctgactttattaaaatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgatatcatgcagtttgtcccataccatttacctatagaaagtctgactttattaaaatg 384
Query: 185 taagactctaataatgctttttactgaaaaagaaaacactgatcagctctgagcttgctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taagactctaataatgctttttactgaaaaagaaaacactgatcagctctgagcttgctc 444
Query: 245 tctctagttttctgatcatagctcttgacataaagcagtgtcactccataaggtgctaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctctagttttctgatcatagctcttgacataaagcagtgtcactccataaggtgctaca 504
Query: 305 cggatctcttttcatttgggtaaaaacactgatctaaattaagtttgaccacaattatta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cggatctcttttcatttgggtaaaaacactgatctaaattaagtttgaccacaattatta 564
Query: 365 aatactgtctgcccaaaacagcaaagagtggcatttctcaaagatgcatgtactcttctc 424
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 565 aattctgtctgcccaaaacagcaaagagtggcatttctcaaagatgcaggtactcttttc 624
Query: 425 taaaaaggtacacttgccagactaaggcttgcatagattgggttattaaagagtaattac 484
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 625 taaaaaggtacacttgccagactaaggcttgcacagattgggttattaaagagtaattac 684
Query: 485 ggtcacactgggaaattttgtagaattaagattctgctttagtcaaaatggtggatatcc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggtcacactgggaaattttgtagaattaagattctgctttagtcaaaatggtggatatcc 744
Query: 545 cactttccaaatgtccctaaataatgctgaatggaaaaggttttaggttcttaaaataat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cactttccaaatgtccctaaataatgctgaatggaaaaggttttaggttcttaaaataat 804
Query: 605 attttattatttcaacagagaagttaggaagat 637
|||||||||||||||||||||||||||||||||
Sbjct: 805 attttattatttcaacagagaagttaggaagat 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
