Query= MSMg01no130_i19.b1 MSMg01no130_i19.b1 CHROMAT_FILE:
MSMg01no130_i19.b1 PHD_FILE: MSMg01no130_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:23 2005
(585 letters)
>mm_chr14_86039890_86040876
Length = 987
Score = 1058 bits (547), Expect = 0.0
Identities = 577/587 (98%), Gaps = 2/587 (0%)
Strand = Plus / Plus
Query: 1 aatttgttctctatactattttatgcattatgtaatgggg-aaaactgcatgccgtctct 59
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 201 aatttgttctctatactattttatgcattatgtaatggggaaaaactgcatgcggtctct 260
Query: 60 gtggtcttggagcttgaagagtgatagccctgtgataagcactctaatccttacggcctt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggtcttggagcttgaagagtgatagccctgtgataagcactctaatccttacggcctt 320
Query: 120 attttatcattacagcaaaataattatactactgttatttcc-ttttacctacaataatg 178
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 attttatcattacagcaaaataattatactactgttatttcctttttacctacaataatg 380
Query: 179 tagcactaagtagggtttccacttttcttatatcctatggttcataagcgtgaacctgga 238
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 tagcactaagtagggtttccactttccttatatcctatggttcataagcgtgaacctgga 440
Query: 239 gtccaccttttctatatttgctggagcctgccaaggttcactgcaattagaattactgac 298
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtccaccttttctatagttgctggagcctgccaaggttcactgcaattagaattactgat 500
Query: 299 gctgcgtattaaggctttaagctgttactagctgaaacaaaatgtgcaaaaccttgtccg 358
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcagtgtattaaggctttaagctgttactagctgaaacaaaatgtgcaaaaccttgtccg 560
Query: 359 ttctccattttcttctcctctaaatgactataagatttatcaaacacagaaatctaggga 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctccattttcttctcctctaaatgactataagatttatcaaacacagaaatctaggga 620
Query: 419 aaaaatttcaattactaactagttgatccatggtgtcaacctctccttatgcttccttcc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaaatttcaattactaactagttgatccatggtgtcaacctctccttatgcttccttcc 680
Query: 479 attccaacttcacaaataacacatattaatgagggccaaattcattgaagtttcctagct 538
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 681 attccaacttcacagataacacatattaatgagggccaaattcattgaagtttcctggct 740
Query: 539 gtgaactgctattggacttcaattctgtgttcatcctctttgaagga 585
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtgaactgctattggacttcaattctgtgttcatcctctttgaagga 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 987
Length adjustment: 10
Effective length of query: 575
Effective length of database: 977
Effective search space: 561775
Effective search space used: 561775
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_i19.g1 MSMg01no130_i19.g1 CHROMAT_FILE:
MSMg01no130_i19.g1 PHD_FILE: MSMg01no130_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:23 2005
(290 letters)
>mm_chr14_86214202_86214891
Length = 690
Score = 522 bits (270), Expect = e-153
Identities = 285/290 (98%)
Strand = Plus / Minus
Query: 1 acttgatgaaagaagaggctatgacatcgcaaagacttcaagtgattttttctttttttt 60
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 490 acttgatgaaagaagaggctatgacatcgcaaagacttcaagtgaaattttctttttttt 431
Query: 61 tctaagtctttacatatataggataaaattagaattttgctaaagcatatttcacccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tctaagtctttacatatataggataaaattagaattttgctaaagcatatttcacccatg 371
Query: 121 gcttctgaggcaatttttatacaagtgttttagtagagactagcaatataaagatctgag 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 370 gcttctgaggcaatttttatacaagtgttttagtagagactagtaatataaagatctgag 311
Query: 181 aagaaaaacgcatgatcataaatatctaattgctagaaatttccttcaaggcgacacctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aagaaaaacgcatgatcataaatatctaattgctagaaatttccttcaaggcgacacctg 251
Query: 241 ctccagttctcctttctttttagccctgtacttctcctttcctttcctct 290
||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 250 ctccagttctcctctccttttagccctgtacttctcctttcctttcctct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
