Query= MSMg01no132_i20.b1 MSMg01no132_i20.b1 CHROMAT_FILE:
MSMg01no132_i20.b1 PHD_FILE: MSMg01no132_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:05 2005
(609 letters)
>mm_chr14_46719977_46720985
Length = 1009
Score = 851 bits (440), Expect = 0.0
Identities = 466/478 (97%), Gaps = 8/478 (1%)
Strand = Plus / Minus
Query: 134 cacacacagtcatgagcacac--acagtcatgagcacacaaacacacacacacacacaca 191
||||||||||||||||||||| ||| || |||||| |||||||||||||||||||
Sbjct: 1005 cacacacagtcatgagcacacaaaca--ca----cacacacacacacacacacacacaca 952
Query: 192 cacacacacacacacacacacacacacacacacacagtcatgagcacacacgtatcccaa 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 cacacacacacacacacacacacacacacacacacagtcatgagcacacacgtatcccaa 892
Query: 252 acaaacaatgtttaaagtctttatgtgccctatatttttggaagactctttccctaggta 311
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 891 acaaacaatgtttaaagtctttatgtgccctagatttttggaagactctttccctaggta 832
Query: 312 ccgagttctaggcggacgatttgacagctcttcttgttccagtcctcagcgtcattgtct 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 ccgagttctaggcggacgatttgacagctcttcttgttccagtcctcagcgtcattgtct 772
Query: 372 acaacgagaagctgcctcacttcttccctgctggcaccaaatagcctgtgtcctctggtt 431
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 agaatgagaagctgcctcacttcttccctgctggcaccaaatagcctgtgtcctctggtt 712
Query: 432 ccccagggggtgaggacacatcactggtgcacagctcggtcaccatgctcttctctttat 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ccccagggggtgaggacacatcactggtgcacagctcggtcaccatgctcttctctttat 652
Query: 492 gagattttatttccgttttttaccacttgtggttcactaaaattcctacaactgagttat 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gagattttatttccgttttttaccacttgtggttcactaaaattcctacaactgagttat 592
Query: 552 agattcaaaccaaagcacttttactccaaccacatccttttgactttttcttgcttat 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 agattcaaaccaaagcacttttactccaaccacatccttttgactttttcttgcttat 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 153
Number of extensions: 53
Number of successful extensions: 53
Number of sequences better than 10.0: 1
Number of HSP's gapped: 47
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_i20.g1 MSMg01no132_i20.g1 CHROMAT_FILE:
MSMg01no132_i20.g1 PHD_FILE: MSMg01no132_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:06 2005
(630 letters)
>mm_chr14_46551462_46552491
Length = 1030
Score = 1218 bits (630), Expect = 0.0
Identities = 630/630 (100%)
Strand = Plus / Plus
Query: 1 cagttttcctaggagcctgtgctatcaggcagcttcacagtaccccatcctaagtagcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagttttcctaggagcctgtgctatcaggcagcttcacagtaccccatcctaagtagcct 260
Query: 61 tgcttcctttgggatgaggtctgaacacatgggcatggatctaaaacttgagagtggtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcttcctttgggatgaggtctgaacacatgggcatggatctaaaacttgagagtggtat 320
Query: 121 ctgtgagtcccgtagcttctctcagagcacctttgcacatacagtttttgcactgtgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtgagtcccgtagcttctctcagagcacctttgcacatacagtttttgcactgtgtgt 380
Query: 181 ttctaaaggcatggtaccagtaaagatccaaggtctggaccaaagacattttgaaatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctaaaggcatggtaccagtaaagatccaaggtctggaccaaagacattttgaaatttt 440
Query: 241 gattttttttccatcagattcccttactagaagttttacgtgtctccatgagtcataaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gattttttttccatcagattcccttactagaagttttacgtgtctccatgagtcataaca 500
Query: 301 gagcatcagacactactcaccacctccgttggcacttaatgcacgggtactttctgcctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagcatcagacactactcaccacctccgttggcacttaatgcacgggtactttctgcctc 560
Query: 361 aaatgtatatattgattgtggttgcaacaagggaacttcactagaagagaaaccctatcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatgtatatattgattgtggttgcaacaagggaacttcactagaagagaaaccctatcc 620
Query: 421 tgaaaaaatccaactggtcaaccaaccaaccaaccaaccaaaaaaaatctcttccaacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgaaaaaatccaactggtcaaccaaccaaccaaccaaccaaaaaaaatctcttccaacta 680
Query: 481 tcgccaagtctttctaatttgaaggttcaaatttatgacctcttctttaattattatgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcgccaagtctttctaatttgaaggttcaaatttatgacctcttctttaattattatgtc 740
Query: 541 tgtatacatatatgtatgtataaacgcaacctcccgagaccatttagaattgctccatat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtatacatatatgtatgtataaacgcaacctcccgagaccatttagaattgctccatat 800
Query: 601 atatgtatatatttagggttaaccatagga 630
||||||||||||||||||||||||||||||
Sbjct: 801 atatgtatatatttagggttaaccatagga 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
