Query= MSMg01no137_h14.b1 MSMg01no137_h14.b1 CHROMAT_FILE:
MSMg01no137_h14.b1 PHD_FILE: MSMg01no137_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:10 2005
(635 letters)
>mm_chr14_71088686_71089719
Length = 1034
Score = 1178 bits (609), Expect = 0.0
Identities = 627/633 (99%), Gaps = 1/633 (0%)
Strand = Plus / Plus
Query: 3 ggaattcaaaaactttcacgaggaaggccctatgtttttcccggcaatgcaaaaatttag 62
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattcaaaaactttcatgaggaaggccctatgtttttcccggcaatgcaaaaatttag 262
Query: 63 atgaaccccatatcttatcaaacccaaccttgctatacaaaaaaaaccacataactgtaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atgaaccccatatcttatcaaacccaaccttgctatacaaaaaaaaccacataactgtaa 322
Query: 123 gaataatcatactaagtacaatttaaaaaaaattttttacaaagcctatttaataggctt 182
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 323 gaataatcatactaagtacaattt-aaaaaaattttttacaaagcctatttaataggctt 381
Query: 183 ggtgtatacccaattttgctatgtatactttggtaccaaactggtagtttagcttctcac 242
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 382 ggtgtatacccaattttgctatgtatactttggtaccaaacgggtagtttagcttctcac 441
Query: 243 ctctggtttctgaattgtggctctgtaccaggtcttgccttatctactattcttcagaga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctctggtttctgaattgtggctctgtaccaggtcttgccttatctactattcttcagaga 501
Query: 303 ttttagaacactctgtcctatggtgctatctctactgttctacagtagcatggcaatgcc 362
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 502 tttcagaacactctgtcctatggtcctatctctactgttctacagtagcatggcaatgcc 561
Query: 363 agcaacagcagcagcctttccacatgccacatacagtgttaacttgcatgagttctcata 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agcaacagcagcagcctttccacatgccacatacagtgttaacttgcatgagttctcata 621
Query: 423 agatcacaaggtagtcttattactatttgttgtttataagaaaaggaaatgcaggaacat 482
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 agatcacacggtagtcttattactatttgttgtttataagaaaaggaaatgcaggaacat 681
Query: 483 gcccaagcgtatagctattaaaactggcctagaatctctgcacacttctccatccctagc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gcccaagcgtatagctattaaaactggcctagaatctctgcacacttctccatccctagc 741
Query: 543 actgcttcatggaagccaaatgattggaggaaggctttccagtgaacttcacaaatgccc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 actgcttcatggaagccaaatgattggaggaaggctttccagtgaacttcacaaatgccc 801
Query: 603 ctattttgaaatgactcaagtcataaacagtta 635
|||||||||||||||||||||||||||||||||
Sbjct: 802 ctattttgaaatgactcaagtcataaacagtta 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1034
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1024
Effective search space: 640000
Effective search space used: 640000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_h14.g1 MSMg01no137_h14.g1 CHROMAT_FILE:
MSMg01no137_h14.g1 PHD_FILE: MSMg01no137_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:10 2005
(441 letters)
>mm_chr14_71240536_71241377
Length = 842
Score = 752 bits (389), Expect = 0.0
Identities = 428/441 (97%), Gaps = 3/441 (0%)
Strand = Plus / Minus
Query: 2 tccaaacctaagtgtgttcttctatcccgtgtcgccatgttgtagttttgtgcctttctt 61
|||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 842 tccaaagctaagtgtgttcttctatcccgtgtcgccatgctgtggttttgtgcctttctt 783
Query: 62 ccaaagaaagaataatgcttaatgagatttgtttttccttcactatgcactgtatgctta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ccaaagaaagaataatgcttaatgagatttgtttttccttcactatgcactgtatgctta 723
Query: 122 tctccactttacaaatagaaagatggattcagagggaattaagtaactcacacatgagta 181
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tctacactttacaaatagaaagatggattcagagggaattaagtaactcacacatgagta 663
Query: 182 cacaggtaactaggaagcaaatagtgaacaagggaatcaaatctaacttaggaactctgt 241
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cacaggtaactaggaagcgagtagtgaacaagggaatcaaatctaacttaggaactctgt 603
Query: 242 tgagctttgtattatagttgctgcttgttgcccacttactttcaaccagtgagtttctta 301
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 602 tgagttttgtattatagttgctgcttgttgcccacttactttcaaccagtgagttactta 543
Query: 302 attgagaagctacatctcctcatctcta-a-gtttctaggcagagtatttggtttgtagt 359
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |
Sbjct: 542 attgagaagctacatctcctcatctctatatgtttctaggcagagtatttggtttgtaat 483
Query: 360 gggcactataaaaatatatttatgaaatggatggtgggtgatgggtaaacagtggaagga 419
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 482 gggcactat-aaaatatatttatgagatggatggtgggtgatgggtaaacagtggaagga 424
Query: 420 taagtgggtggtagtagatga 440
|||||||||||||||||||||
Sbjct: 423 taagtgggtggtagtagatga 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 842
Length adjustment: 9
Effective length of query: 432
Effective length of database: 833
Effective search space: 359856
Effective search space used: 359856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
