Query= MSMg01no139_a03.b1 MSMg01no139_a03.b1 CHROMAT_FILE:
MSMg01no139_a03.b1 PHD_FILE: MSMg01no139_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:14 2005
(636 letters)
>mm_chr14_109765819_109766854
Length = 1036
Score = 1137 bits (588), Expect = 0.0
Identities = 625/646 (96%), Gaps = 14/646 (2%)
Strand = Plus / Plus
Query: 5 gaattctttgtttacctctgagccctattttttaaacatcaccagttttacatattacat 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gaattctttgtttagttctgagccctattttttaaacatcaccagttttacatattacat 250
Query: 65 actattggatttcttcatgagaaaatgcatttagaccatacatttcaaccatttgatgtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 actattggatttcttcatgagaaaatgcatttagaccatacatttcaaccatttgatgtg 310
Query: 125 ttccaatttttttctttatgcatattcatctttatgttcatccttttcatttttatattt 184
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttccaatttttttccttatgcatattcatctttatgttcatccttttcatttttatattt 370
Query: 185 tatattaggctttctttgaatcttccaattcaaaatcaatctttagtctttgagatgaac 244
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tatattaggccttctttgaatcttccaattcaaaatcaatctttagtctttgagatgaac 430
Query: 245 atttgtctttgttttggaggtgaagaaaatcgattcttccaaacagcaggtatttttagt 304
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 431 atttgtctttgttttggaggtgaagaaaatctattcttccaaacagcaggtatttttagt 490
Query: 305 tttctttccaaaaccgttgactgaaagattgtaaactcaaggtcaataaaagatgtgttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tttctttccaaaaccgttgactgaaagattgtaaactcaaggtcaataaaagatgtgttt 550
Query: 365 cctttataagatagtactattgaagaaaccaggtaatatgaactacacggtatacttgat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 cctttataagatagtactattgaagaaaccaggtaatatgaactacacggtatacttgat 610
Query: 425 ctctctct--------------ttctctctctctcttatttatttatgatcttcattcta 470
|||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ctctctctctctctctctctctttctctctctctcttatttatttatgatcttcattcta 670
Query: 471 gtcattatccaactttgaatgaaatgattttttgatcactttggagaaataatacagctg 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gtcattatccaactttgaatgaaatgattttttgatcactttggagaaataatacagctg 730
Query: 531 ggaacgctcacctgcttcctgagcaaggaatatttttccttttagttttgttttttattc 590
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 731 ggaacgctcacctgcttcctcatcaaggaatatttttccttttagttttgttttttattc 790
Query: 591 tctaagatcttcttctgggtgatcacttttatattttaattccata 636
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tctaagatcttcttctgggtgatcacttttatattttaattccata 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_a03.g1 MSMg01no139_a03.g1 CHROMAT_FILE:
MSMg01no139_a03.g1 PHD_FILE: MSMg01no139_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:14 2005
(603 letters)
>mm_chr14_109911054_109912056
Length = 1003
Score = 1073 bits (555), Expect = 0.0
Identities = 591/603 (98%)
Strand = Plus / Minus
Query: 1 ttaatatcttaatatcttttatgattccactgtgtaatcttaatgaagcattttgcttgg 60
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 963 ttaatatcttaatatcttttatgatttcactgtgtaatctttctgaagcattttgcttgg 904
Query: 61 tgagataaacagtagaattaaattagcaattcttagacaatgtagaatattatggatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 tgagataaacagtagaattaaattagcaattcttagacaatgtagaatattatggatgta 844
Query: 121 aaatatcaattatattaatgttaatcattttttttaatttcaccagaaaaagccatttta 180
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 843 aaatatcaattatattaatgttaatcattttttaaaatttcaccagaaaaagccatttta 784
Query: 181 gggaaatgattaacaggaggcaagtatagaaaatatctactattaccaacatccagtaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gggaaatgattaacaggaggcaagtatagaaaatatctactattaccaacatccagtaca 724
Query: 241 aactgaatgagaaagaagagagttgggagtacctagaaatattcaaagaaggaacataat 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 723 gactgaatgagaaagaagagagttgggagtacctagaaatattcaaagaaggaacatgag 664
Query: 301 aaaatggtcaaaatggatgatatatatcttggaaaatatcattacaaatataaatattgt 360
||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||
Sbjct: 663 aaaatggtcaaaatggatgatgtatatcttggaaaatatcattataaatgtaaatattgt 604
Query: 361 gcataatgaatatattcaattcaaatttgaagttatgattttatatcttttgaaattaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gcataatgaatatattcaattcaaatttgaagttatgattttatatcttttgaaattaaa 544
Query: 421 aaaaatgaataatgaggaatccaatttctgaaaacagaaattggaaggcaagagccatgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aaaaatgaataatgaggaatccaatttctgaaaacagaaattggaaggcaagagccatgg 484
Query: 481 cccctcaataatctgctggaagaatttgtaggtaacaaggctgtgatcagagacaattaa 540
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cccctcaatagtctgctggaagaatttgtaggtaacaaggctgtgatcagagacaattaa 424
Query: 541 aacaaagcaaaataaaacaaagcatttacacatgtggacattaataagtatcataaagga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aacaaagcaaaataaaacaaagcatttacacatgtggacattaataagtatcataaagga 364
Query: 601 aaa 603
|||
Sbjct: 363 aaa 361
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space: 588849
Effective search space used: 588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
