Query= MSMg01no139_a07.b1 MSMg01no139_a07.b1 CHROMAT_FILE:
MSMg01no139_a07.b1 PHD_FILE: MSMg01no139_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:15 2005
(657 letters)
>mm_chr14_17066483_17067539
Length = 1057
Score = 1239 bits (641), Expect = 0.0
Identities = 650/653 (99%)
Strand = Plus / Plus
Query: 5 gaattctccaagttgctttgttattgtttcaatgcttcatgctgattatttcaggacaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccaagttgctttgttattgtttcaatgcttcatgctgattatttcaggacaat 264
Query: 65 tttcttgaagactagataaggcactttatactgtagcaaaccattctcgtgtacaaatcc 124
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 265 tttcttgaagactagataaggcactttatactgtagcaaaccattctcatgtacaaatcc 324
Query: 125 ccaatgaatcccaacgataacagaataaacatgcctgatgataatgatgatgatgtttat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccaatgaatcccaacgataacagaataaacatgcctgatgataatgatgatgatgtttat 384
Query: 185 atagatattaacaatataaaaacattttgtgaacctaacaaccaatttcccgaatataga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atagatattaacaatataaaaacattttgtgaacctaacaaccaatttcccgaatataga 444
Query: 245 aatgtccctgagaagaactagctatgctccattagccaaccttactagagcttagagacc 304
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 aatgtccctgagaagaactagctatgctccattagccagccttactagagcttagagacc 504
Query: 305 actgttagatacattatcatttactattattttattatagctgttttgagagggttccac 364
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 505 actgttagatacattatcatttactattattttattatagctgttttgggagggttccac 564
Query: 365 tctgtagcccagaatggccaggaatgctctagtaactcttgatacttcagattcacaaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctgtagcccagaatggccaggaatgctctagtaactcttgatacttcagattcacaaca 624
Query: 425 ttctcccctcctcagcctctccagtgctgaaattacaggcaggtaccactttgcctagct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttctcccctcctcagcctctccagtgctgaaattacaggcaggtaccactttgcctagct 684
Query: 485 tgttgtacaggcactattaaattcactttagggcctagactaggaacttagatccagatc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgttgtacaggcactattaaattcactttagggcctagactaggaacttagatccagatc 744
Query: 545 tactgagtcttcctctcatctcaggatgccactttgaacagcaagtagcctttgtggtga 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tactgagtcttcctctcatctcaggatgccactttgaacagcaagtagcctttgtggtga 804
Query: 605 gccactccccacaagtctatcattaacaggggatggccacagcagaaccaaac 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gccactccccacaagtctatcattaacaggggatggccacagcagaaccaaac 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_a07.g1 MSMg01no139_a07.g1 CHROMAT_FILE:
MSMg01no139_a07.g1 PHD_FILE: MSMg01no139_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:15 2005
(633 letters)
>mm_chr14_17245611_17246643
Length = 1033
Score = 982 bits (508), Expect = 0.0
Identities = 521/526 (99%), Gaps = 4/526 (0%)
Strand = Plus / Minus
Query: 1 tttc-aaatgtcttgcacagtttcatacttcttca-acatcccatatgatcaaagagtac 58
|||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 524 tttcaaaatgtcttgcacagtttcatacttcttcagacaacccatatgatcaaagagtac 465
Query: 59 ctacataaaatacaaagattttgctttaaatccaataaatctgtactggtattttaattt 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ctacataaaatacaaagattttgctttaaatccaataaatctgtactggtattttaattt 405
Query: 119 atataatatgtatagtacttaaaataactctaatatgaatatgtactacccctgaaacca 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 atataatatgtatagtacttaaaataactctaatatgaatatgtactacccctgaaacca 345
Query: 179 cttaaaaatataaaccaaaattattaaaaacatttctataaatatttctttagtgacaga 238
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 cttaaaa--ataaaccaaaattattaaaaacatttctataaatatttctttagtgacaga 287
Query: 239 aatttgataaatgcaattaccataaactatgggaaagtttaaaatagtaaaaattgtaaa 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aatttgataaatgcaattaccataaactatgggaaagtttaaaatagtaaaaattgtaaa 227
Query: 299 agactattttttagaggatttcttaggaggctggagtggtggcttgcagttaaaagtaca 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 agactattttttagaggatttcttaggaggctggagtggtggcttgcagttaaaagtaca 167
Query: 359 tactattcttgcagaagacctgagtttggtacctagcatcagaggaaagaaattaattgc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tactattcttgcagaagacctgagtttggtacctagcatcagaggaaagaaattaattgc 107
Query: 419 tagattctttagcattcaagttcattgttgtggctcttattataataatccaatgtatga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tagattctttagcattcaagttcattgttgtggctcttattataataatccaatgtatga 47
Query: 479 ccatttaaaaaagattatattaccatggaattgcaagtaagagtag 524
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 ccatttaaaaaagattatattaccatggaattgcaagtaagagtag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
