Query= MSMg01no139_i01.b1 MSMg01no139_i01.b1 CHROMAT_FILE:
MSMg01no139_i01.b1 PHD_FILE: MSMg01no139_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:55 2005
(596 letters)
>mm_chr14_22931398_22932393
Length = 996
Score = 1091 bits (564), Expect = 0.0
Identities = 588/596 (98%)
Strand = Plus / Minus
Query: 1 agaatgagcaaccaggggggaaagtgtcccacttatttaaccaacaaatatattaaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 agaatgagcaaccaggggggaaagtgtcccacttatttaaccaacaaatatattaaatat 667
Query: 61 gtgttgagttcaagccctgcgctaaacacagtaatatcaaatataagtactatctgcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gtgttgagttcaagccctgcgctaaacacagtaatatcaaatataagtactatctgcttc 607
Query: 121 tatccaaaaagacaatccaaggtacagctagctaatcacaagagcctggggagacagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tatccaaaaagacaatccaaggtacagctagctaatcacaagagcctggggagacagaga 547
Query: 181 cagagcacgtacatgtaaacagcgtggctggggagtcgctggaaaggaagcagaagtatt 240
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 546 cagagcacgtacatgcaaacagcatggctggggagtcgctggaaaggaagcagaagtatt 487
Query: 241 caatcctctctgttgacgagggggcatcattgatcttggcatctagcaaacagtggcaca 300
|||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 caatcctctctgctgatgggggggcatcattgatcttggcatctagcaaacagtggcaca 427
Query: 301 gggatgccaagaagggagaaagatgtttctacaggagccagcaaggggaaaaatgagact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gggatgccaagaagggagaaagatgtttctacaggagccagcaaggggaaaaatgagact 367
Query: 361 gtcagtttggcttggtgctggggagatggaagacagtatgtgcaatcaagcctcctatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gtcagtttggcttggtgctggggagatggaagacagtatgtgcaatcaagcctcctatgg 307
Query: 421 ccacacacaggacaaataccagaaccatattctcttgtaggtgtcctcctatataccacc 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 306 ccacacacaggacaaataccagaaccatattctcttataggtgtcctcctatataccacc 247
Query: 481 tataccaacctccaaacttgaaaccctcccctgatgggtccatcgatagccttcctgcac 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 246 tataccaacctccaaacttgaaaccctctcctgatgggtccatcgatagccttcctgcac 187
Query: 541 atcctgcatcatgcaaaaccctttctggccccagggcctttgcacttgctctgtgc 596
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 186 atcctgcatcatgcaaaacccattctggccccagggcctttgcacttgctctgtgc 131
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_i01.g1 MSMg01no139_i01.g1 CHROMAT_FILE:
MSMg01no139_i01.g1 PHD_FILE: MSMg01no139_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:55 2005
(631 letters)
>mm_chr14_22883052_22884081
Length = 1030
Score = 1067 bits (552), Expect = 0.0
Identities = 613/638 (96%), Gaps = 10/638 (1%)
Strand = Plus / Plus
Query: 1 cagtccttatacatacacagcaagtgcttaacccactcggttccctccccacccttccac 60
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtccttacaaatacacagcaagtgcttaacccactcggttccctccccacccttccac 260
Query: 61 tcaaaatctcaaagcaaaagaaatgttattcagatccttggctaataatctccttatctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaaaatctcaaagcaaaagaaatgttattcagatccttggctaataatctccttatctg 320
Query: 121 tttagatgtgtctgacattcattgttctccactattagtgataagagtattttcatgaat 180
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 321 tttagatgcgtctgacattcattgttctccactattagcgataagagtattttcatggat 380
Query: 181 catttttgtattaaaaacagaagtcaggcatttaagatctgcttgtgacttcagagtaca 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 catttttgtattaaaaacagaagtcaggcatttaagatctgcttgtgatttcagagtaca 440
Query: 241 ttttggccaatttgacaaaacaaaaacattcatgaaagttgatgtttctttctttttttt 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttggccaatttgacaagacaaaaacattcatgaaagttgatgtttctttctttttttt 500
Query: 301 tgacatttttaattagatattttattcatttacatttcaaatgctatctcaaaagtcccc 360
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 -gacattttaaattagatattttattcatttacatttcaaatgctatcccaaaagtcccc 559
Query: 361 tataccttctccccaccctac--------ccactcacccccacttcttggccctggcttt 412
||||||||||||||||||||| |||||||| || |||||||||||||||||||
Sbjct: 560 tataccttctccccaccctactcccctacccactcactcctacttcttggccctggcttt 619
Query: 413 cccctgtactgggacatataaagtttgctagaccaaggggcctctcttcccagtgatggc 472
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 620 cccctgtactgggacatataaagtttgctagaccaaggggcctctcttcccaatgatggc 679
Query: 473 caactaggccatcttctgctacatatgcagctagagacatgagctctggggggtactggt 532
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 680 cgactaggccatcttctgctacatatgcagctagagacatgagctctggggg-tactggt 738
Query: 533 tagttcatattgttgttcctcctatagcgttgcagaccccttcagctcttgggtactttc 592
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tagttcatattgttgttccacctatagcgttgcagaccccttcagctcttgggtactttc 798
Query: 593 tctagctcttacactgggggctctgtgtttttttctta 630
||||||||||||||||||||| ||||||||||||||||
Sbjct: 799 tctagctcttacactgggggccctgtgtttttttctta 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1030
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1020
Effective search space: 633420
Effective search space used: 633420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
