Query= MSMg01no140_c22.b1 MSMg01no140_c22.b1 CHROMAT_FILE:
MSMg01no140_c22.b1 PHD_FILE: MSMg01no140_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:50 2005
(612 letters)
>mm_chr14_33362653_33363665
Length = 1013
Score = 1156 bits (598), Expect = 0.0
Identities = 607/610 (99%), Gaps = 1/610 (0%)
Strand = Plus / Minus
Query: 4 gaattcagtggtcctatc-cactcaacccttcccacagaatttccaagccatgttgtcac 62
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 gaattcagtggtcctaacaaactcaacccttcccacagaatttccaagccatgttgtcac 754
Query: 63 caaaggcagggcccagtcagggtctttcactctccctagggagagcaggactctgccctg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 caaaggcagggcccagtcagggtctttcactctccctagggagagcaggactctgccctg 694
Query: 123 gtccctgaccccagcccctacaatgatagcattccttttaaaggattaaatgtgccaggt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gtccctgaccccagcccctacaatgatagcattccttttaaaggattaaatgtgccaggt 634
Query: 183 tctttatagcctccagtgagaataaaaccgagttgttatctatatgcacttgacagggat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tctttatagcctccagtgagaataaaaccgagttgttatctatatgcacttgacagggat 574
Query: 243 taggaaatagccaatcaacagctgtctacaatggtcgaaagcatgctccctccaaacaag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 taggaaatagccaatcaacagctgtctacaatggtcgaaagcatgctccctccaaacaag 514
Query: 303 ttggaatgtgtacgtacagctctttgggttgtacagcatttcttctcctaatagcacacc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ttggaatgtgtacgtacagctctttgggttgtacagcatttcttctcctaatagcacacc 454
Query: 363 tcctataaactgctatgtcgatgatacgcttgctcacttacggctgctatttaatcccag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tcctataaactgctatgtcgatgatacgcttgctcacttacggctgctatttaatcccag 394
Query: 423 ctgacctgccacctggctctgctgtgtcctttaatttctgtcattcttactattagaaga 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ctgacctgccacctggctctgctgtgtcctttaatttctgtcattcttactattagaaga 334
Query: 483 ggttttcatgctgagctgaaatcccacagctgaggcagtctactcctggaccaaagaggg 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggttttcatgctgagctgaaatcccacagctgaggcagtctactcctggaccaaagaggg 274
Query: 543 ggcaatcaaatccattaacaggcaagtgaaccactttctgagcctcaatatcactgagat 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ggcaatcaaatccattaacaggcaagtgaaccactttctgagcctcaatatcactgagat 214
Query: 603 gattcgaaat 612
||||||||||
Sbjct: 213 gattcgaaat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1013
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1003
Effective search space: 603806
Effective search space used: 603806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_c22.g1 MSMg01no140_c22.g1 CHROMAT_FILE:
MSMg01no140_c22.g1 PHD_FILE: MSMg01no140_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:50 2005
(454 letters)
>mm_chr14_33231546_33232399
Length = 854
Score = 828 bits (428), Expect = 0.0
Identities = 447/454 (98%), Gaps = 2/454 (0%)
Strand = Plus / Plus
Query: 1 aaggccatcctgggcaacttgatgagactctgtttcaaaataaaaaagttaaaaaaaaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aaggccatcctgggcaacttgatgagactctgtttcaaaataaaaaagttaaaaaaaaa- 261
Query: 61 aggactccccaaatagcttagtgctacagcacttgcctagcatgtgcaaaagcctggatt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 -ggactccccaaatagcttagtgctacagcacttgcctagcatgtgcaaaagcctggatt 320
Query: 121 aatcccagtgccataaaaataaataaaataaaaatgaataaaaacgggacgtggtagcct 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatcccagtgccgtaaaaataaataaaataaaaatgaataaaaacgggacgtggtagcct 380
Query: 181 tgccgagtcactgagcagttggcgctgctgaggaacggccactcaccatgactgtgtact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgccgagtcactgagcagttggcgctgctgaggaacggccactcaccatgactgtgtact 440
Query: 241 cagtttgggcctggatggctctctgcagcagctgcagtttctcagaagcctgtgaacaaa 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtttgggcctggatggccctctgcagcagctgcagtttctcagaagcctgtgaacaaa 500
Query: 301 gaagaggttcagccgtggatggcagatgcagccagggagtccgtgtgtgcggaacaaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 gaagaggttcagccgtggatggcagatgcagccagggagtccgtgtgtgtggaacaaagt 560
Query: 361 gcaccgtggcccatggtggcctccctggcctccctgtggccccttaaggcacagcggggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 gcaccgtggcccatggtggcctccctggcctccctgtggccccttaaggcagagcggggc 620
Query: 421 ttaccagcacggcagccttgtggccagtcatggc 454
||||||||||||||||||||||| ||||||||||
Sbjct: 621 ttaccagcacggcagccttgtggtcagtcatggc 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
