Query= MSMg01no140_f11.b1 MSMg01no140_f11.b1 CHROMAT_FILE:
MSMg01no140_f11.b1 PHD_FILE: MSMg01no140_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:02 2005
(571 letters)
>mm_chr14_112596299_112597269
Length = 971
Score = 1056 bits (546), Expect = 0.0
Identities = 558/562 (99%)
Strand = Plus / Minus
Query: 1 gttgatcattatccatctgactatgtttagctttgtttattttagcatgctaatgtattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gttgatcattatccatctgactatgtttagctttgtttattttagcatgctaatgtattt 503
Query: 61 cattacagctgcacctgttactgtcagtgaatttaagggtcctatacttctagtacattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cattacagctgcacctgttactgtcagtgaatttaagggtcctatacttctagtacattc 443
Query: 121 ctatttttagaatagtatttggtatatcagctacatcaaatacttttagtactgaagtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctatttttagaatagtatttggtatatcagctacatcaaatacttttagtactgaagtga 383
Query: 181 tttaaactaagaatcagcaaacacagatgaatatgtctgtaagtattctcttattgtcat 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 382 tttaaactaagaatcagcaaacacacatgaatatgtctgtaagtattctcttattgtcat 323
Query: 241 tactgtttctgtgctttttttaagagcaattaatgaggtattgacatcatattgcattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tactgtttctgtgctttttttaagagcaattaatgaggtattgacatcatattgcattct 263
Query: 301 ttataagacaatgaataatgcaaaaagcaaaattgtacaagtcaatatcatttattcata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttataagacaatgaataatgcaaaaagcaaaattgtacaagtcaatatcatttattcata 203
Query: 361 agatatatttttataatttttgaaattaaaataagaaacttttctttcccaatataacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 agatatatttttataatttttgaaattaaaataagaaacttttctttcccaatataacag 143
Query: 421 aatatttataataaccccggaaacaatatgataactaactaatgagcttacttctctctg 480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 aatatttataataaccccgaaaacaatatgataactaactaatgagcttacttctctctg 83
Query: 481 gaaaatccttatgaaaaagaaaatgtgctggatattgctctgtaagcaggcatgccaatc 540
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 82 gaaaatccttataaaaaagaaaatgtgctggatattgctctgtaggcaggcatgccaatc 23
Query: 541 tgagtttaaggtcagtctacag 562
||||||||||||||||||||||
Sbjct: 22 tgagtttaaggtcagtctacag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_f11.g1 MSMg01no140_f11.g1 CHROMAT_FILE:
MSMg01no140_f11.g1 PHD_FILE: MSMg01no140_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:02 2005
(433 letters)
>mm_chr14_112465474_112466307
Length = 834
Score = 661 bits (342), Expect = 0.0
Identities = 384/402 (95%), Gaps = 9/402 (2%)
Strand = Plus / Plus
Query: 1 aaataacttttatagtttgtacaaataagaataggggctagaggatggttcagtctttac 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aaataacttttacagtttgtacaaataagaataggggctagaggatggttcagtctttac 252
Query: 61 aag----caaacaaacaacaaaaagcagacttgttcatctttgagagaacctgactttgt 116
||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 253 aagcaaacaaacaaacaacaaaaagcagacttgttcatctttgagagaacctgattttgt 312
Query: 117 tggccaaaaccaacatgttggctcacaaatctctataactccaattttaggagatttgaa 176
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 313 tggccaaaaccaacatgttgactcacaaatgtctataactccaattttaggagatttgaa 372
Query: 177 atccttttgtaatctacatggacaccacatctacgtccagggaaaacactcaca----ca 232
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 373 atccgtttgtaatctacatggacaccacatctacgtccagggaaaacactcacatacaca 432
Query: 233 caaaagaacatacagtttttaatgaaatatgttgtctttaattttctttctgccctcttc 292
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 433 caaaagaacatacagtttttaatgaaatatgttgtctctaattttctttctgccctcttc 492
Query: 293 cactctcttttgtagtgtttcttccctttgccccttctgctctctgctagtccctgaatc 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cactctcttttgtagtgtttcttccctttgccccttctgctctctgctagtccctgaatc 552
Query: 353 ctatgctaggtaagctatagtt-atagttatatttatagtta 393
|||||||||||||||||||||| | || |||| |||||||||
Sbjct: 553 ctatgctaggtaagctatagtttagagctatagttatagtta 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 834
Length adjustment: 9
Effective length of query: 424
Effective length of database: 825
Effective search space: 349800
Effective search space used: 349800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
