Query= MSMg01no140_k09.b1 MSMg01no140_k09.b1 CHROMAT_FILE:
MSMg01no140_k09.b1 PHD_FILE: MSMg01no140_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:26 2005
(627 letters)
>mm_chr14_76487763_76488789
Length = 1027
Score = 1102 bits (570), Expect = 0.0
Identities = 612/626 (97%), Gaps = 3/626 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactctgtccagcaggctggccttgagcttac-tagatatgcctgcctctgcct 62
|||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 203 ggaattcactctgtagagcaggctggccttgagcttacatagatatgcctgcctctgcct 262
Query: 63 tccaagtgctgggattaaaggcgctcatcaccatgctagtcagaattaatactctcgtat 122
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct: 263 tccaagtgctgggattaaaggcactcatgaccatgctagtcagaattaatactcttgtat 322
Query: 123 aaagttttatatgc-gaaaacccattcactttagtcaaagggtagatctgtctaaatcta 181
|||||||||||||| |||| |||||||||||||| |||||||||||||| ||||||||||
Sbjct: 323 aaagttttatatgcagaaa-cccattcactttagccaaagggtagatctatctaaatcta 381
Query: 182 tggggacaagaagtctgtttaatttactcaaaataattcaggttttaagaagcagcagtc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tggggacaagaagtctgtttaatttactcaaaataattcaggttttaagaagcagcagtc 441
Query: 242 cttgaataggctgtttatactagtataaaaattgtgccactattaagaaatactttatat 301
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cttgaataggctgtttataccagtataaaaattgtgccactattaagaaatactttatat 501
Query: 302 tgtaatttgaacagtttgcctaatttttataaagttcacatgaattgggaatcaaaacat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgtaatttgaacagtttgcctaatttttataaagttcacatgaattgggaatcaaaacat 561
Query: 362 tttcccattataactctatgctttgtgaaaactagaatacagagtcggcagaacaaaaaa 421
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tttcccattacaactctatgctttgtgaaaactagaatacagagtcggcagaacaaaaaa 621
Query: 422 acctgctagaaatgcccagaattcgcatttagcttttctctccctcgttaggagtgtctg 481
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 622 acctgctagaaatgcccagaattcgcatttagcttttctctccctcattaggagtgtctg 681
Query: 482 tttaacagctcaagaggcattgcttacagcactaaaccatataatactcccactgggtgg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tttaacagctcaagaggcattgcttacagcactaaaccatataatactcccactgggtgg 741
Query: 542 ttgcgagtacagattccccatttccagtgattatttggttatttttaaaagccattcaga 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 742 ttgcgagtacagattccccatttccagtgattatttggttatttttaaaagccatccaga 801
Query: 602 attaatattccagtaaaccagataca 627
||||||||||||||||||||||||||
Sbjct: 802 attaatattccagtaaaccagataca 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_k09.g1 MSMg01no140_k09.g1 CHROMAT_FILE:
MSMg01no140_k09.g1 PHD_FILE: MSMg01no140_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:26 2005
(401 letters)
>mm_chr14_76646086_76646886
Length = 801
Score = 721 bits (373), Expect = 0.0
Identities = 394/401 (98%)
Strand = Plus / Minus
Query: 1 tgctaagagccaggcccatgactgtaagtccagcatatatttgattaaatgctcatttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgctaagagccaggcccatgactgtaagtccagcatatatttgattaaatgctcatttag 445
Query: 61 ggacactgtattgataggaaaatggttataagttgcacaagtgttttcaggcaacagaat 120
|||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| |||
Sbjct: 444 ggacactgtactgataggaaaatggttataagttgcacaagtgtcttcatgcaacacaat 385
Query: 121 ttcgtgtgttgtagattatgcatcagttattttgctaaagctgcagaaagaaatcactcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttcgtgtgttgtagattatgcatcagttattttgctaaagctgcagaaagaaatcactcc 325
Query: 181 aagcctgttaatcacgagggcattgtgggaggaagagacttgaaatgatcccccaaggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagcctgttaatcacgagggcattgtgggaggaagagacttgaaatgatcccccaaggac 265
Query: 241 tcaaaagtactctgagaaatgaagccagggatgtcagcggagattgtagagtagatgagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcaaaagtactctgagaaatgaagccagggatgtcagcggagattgtagagtagatgagc 205
Query: 301 acacgtggcttacttagggttacgattgctgtgatgaaacaccatgaccaaaaccaaccc 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 acacctggcttacttagggttacgattgctgtgatgaaacaccatgaccaaaaccaaccc 145
Query: 361 ggggagtgaccaggccagctcagtcagtcagtagggtctca 401
||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 144 gggaagtgaccaggccagctcagtcagtcagcagggtctca 104
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
