Query= MSMg01no141_p05.b1 MSMg01no141_p05.b1 CHROMAT_FILE:
MSMg01no141_p05.b1 PHD_FILE: MSMg01no141_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:58 2005
(678 letters)
>mm_chr14_46200608_46201685
Length = 1078
Score = 1288 bits (666), Expect = 0.0
Identities = 675/678 (99%)
Strand = Plus / Minus
Query: 1 taacccccttccccagccctccccagtcttgccttgagagcccacggcccacagctcctc 60
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 taacccccttccatagccctccccagtcttgccttgagagcccacggcccacagctcctc 819
Query: 61 tagcctcagactgcagagatacatgtcaaaggaaaataacttaacccagttcacttgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 tagcctcagactgcagagatacatgtcaaaggaaaataacttaacccagttcacttgcca 759
Query: 121 caacattgaaaacaagaaacaagttgatctgattaatatgcacacacagtagtcagatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 caacattgaaaacaagaaacaagttgatctgattaatatgcacacacagtagtcagatcc 699
Query: 181 tcacagtgatgttacttgttccatgagagcccacggcccacagctcctctagcctcagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tcacagtgatgttacttgttccatgagagcccacggcccacagctcctctagcctcagac 639
Query: 241 tgcagagatacatgtcaaaggaaaataacttaacccagttcacttgcctcaacattgaaa 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 638 tgcagagatacatgtcaaaggaaaataacttaacccagttcacttgccacaacattgaaa 579
Query: 301 acaagaaacaagttgatctgattaatatgcacacacagtagtcagatcctcacagtgatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 acaagaaacaagttgatctgattaatatgcacacacagtagtcagatcctcacagtgatg 519
Query: 361 ttacttgttccagccctcattagcttgaaggatgctcttgtttgagtctaaatcctgcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ttacttgttccagccctcattagcttgaaggatgctcttgtttgagtctaaatcctgcca 459
Query: 421 ggactcaaccccaagattggatttcccaggagtgcttggtccttggtgcgctgccaagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ggactcaaccccaagattggatttcccaggagtgcttggtccttggtgcgctgccaagga 399
Query: 481 gcattaaaggtgagaggactccctttcctacaacatcccccaatcccccaatgctggcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gcattaaaggtgagaggactccctttcctacaacatcccccaatcccccaatgctggcag 339
Query: 541 acagaccctgggagcaaaaagatttaattaccttaaagagtttgatttcttacaaatgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 acagaccctgggagcaaaaagatttaattaccttaaagagtttgatttcttacaaatgca 279
Query: 601 gagtacccttccttcccatagtcacattccacatagaagatgggagagagaaatgtgggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gagtacccttccttcccatagtcacattccacatagaagatgggagagagaaatgtgggt 219
Query: 661 ggtgtgtatgcacactga 678
||||||||||||||||||
Sbjct: 218 ggtgtgtatgcacactga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space: 713424
Effective search space used: 713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_p05.g1 MSMg01no141_p05.g1 CHROMAT_FILE:
MSMg01no141_p05.g1 PHD_FILE: MSMg01no141_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:00:58 2005
(658 letters)
>mm_chr14_46037382_46038439
Length = 1058
Score = 1089 bits (563), Expect = 0.0
Identities = 631/659 (95%), Gaps = 13/659 (1%)
Strand = Plus / Plus
Query: 3 tgctgtgacgagagaccacaccttacccaaacaaatgaacaaagaaacccacaaaaaaac 62
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 202 tgctgtgacgagagaccacaccttaaacaaacaaatgaacaaagaaacaaacaaaaaaac 261
Query: 63 aacatcaaaacaacaacaacacatggttagatgaagattgttaaccctagctaatagcta 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aacatcaaaacaacaacaacacatggttagatgaagattgttaaccctagctaatagcta 321
Query: 123 aatgtaggtgggtggcaggttctgttccttgtggcttgttaataatgggtaataatagtt 182
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 322 aatgtaggtgggtggcaggttctgttccttgtggcttgttaataatggctaataatagtt 381
Query: 183 atacaggggggttggagagatggctccacagttaagaactcaggctgctcttccaaaggt 242
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 382 atacaggggggttggagagatggctccgcagttaagaactcaggctgctcttccaaaggt 441
Query: 243 cctgaatttaatcccccaacaacaaatggtgtctcacaaccatctgtatgccctcttctg 302
|||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 442 cctgaatttaattccccaacaacaaatggtgactcataaccatctgtatgccctcttctg 501
Query: 303 gtgtgcatgaagacagagcattcttgtacataaaataagtcttt---aaaaaaaaaaaaa 359
|||||||||||||||||||| || |||||||||||||||||||| ||||||||||
Sbjct: 502 gtgtgcatgaagacagagcactcatgtacataaaataagtcttttttaaaaaaaaaa--- 558
Query: 360 aagatgtcctctgacatccacacctgtgctttgatatgtgtctatcctgcccacccaaca 419
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 559 --gatgtcctctgacatccacacctatgctttgatatgtgtctatcctgcccacccaaca 616
Query: 420 caataataaataaaaatatt---tttagatagttacacagattagataaatgtaatggtt 476
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 617 caataataaataaaaatattatttttagatagttacacagattagataaatgtaatggtt 676
Query: 477 tccagtacttgggactgaatttaggatctcaggcgtgctcag-caagcaccgtgcttaga 535
|||||||||||||||||||||||||||||||||||| ||| | |||||||||||| ||||
Sbjct: 677 tccagtacttgggactgaatttaggatctcaggcgtactc-gacaagcaccgtgcctaga 735
Query: 536 cctgtatccccagcttggtctcctccttttaacttttctgggtgtttaacttttttcaga 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 cctgtatccccagcttggtctcctccttttaacttttctgggtgtttaacttttttcaga 795
Query: 596 acaaaaactttgggaaagactttcattagtttttttcttccctgtcaaaaacaagttac 654
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ataaaaactttgggaaagactttcattagtttttttcttccctgtcaaaaacaagttac 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|