Query= MSMg01no143_o22.b1 MSMg01no143_o22.b1 CHROMAT_FILE:
MSMg01no143_o22.b1 PHD_FILE: MSMg01no143_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:37 2005
(630 letters)
>mm_chr14_95372610_95373640
Length = 1031
Score = 1147 bits (593), Expect = 0.0
Identities = 620/633 (97%), Gaps = 11/633 (1%)
Strand = Plus / Minus
Query: 4 gaattcaatctttg-tatcg-ttcaggagaacaatattgcctaatgtgtaagctaaatca 61
|||||||||||||| || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 831 gaattcaatctttgaaat-gtttcaggagaacaatattgcctaatgtgtaagctaaatca 773
Query: 62 cagtagagaaattaaaaacagcagccacagcaatgtatgattagcaaagattatattaga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 cagtagagaaattaaaaacagcagccacagcaatgtatgattagcaaagattatattaga 713
Query: 122 gttctaggaattggctccattcactcaatactatttaaggtaaactatttatgaaaaaga 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gttctaggaattggctccattcactcaatactatttaaggtaaactatttatgaaaaaga 653
Query: 182 aacttcttaattgtatagaagtgtatgatatgaagcatatttctcagtaattttgctttg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 aacttcttaattgtatagaagtgtatgatatgaagcatatttctcagtaattttgctttg 593
Query: 242 taaaaaaagttagtgtttaatatgtgatgcaagtgactcaaagatttcttggattgttta 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 taaaaaaagttagtgtttaatatgtgatgcaagtgactcaaagatttcttggattgttta 533
Query: 302 attctaaatttcctaatccaagttaatcaattcctttaaagcatattgttattatttgaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 attctaaatttcctaatccaagttaatcaattcctttaaagcatattgttattatttgaa 473
Query: 362 tcacaaacaccca----ccccttcctttaaaaaaaagttaaaagaaaaagttaagagttg 417
||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tcacaaacacctatatt----ttcctttaaaaaaaagttaaaagaaaaagttaagagttg 417
Query: 418 agctctataaatgttgtatcccattaggatctgtctcctccagaagggtactctcttgat 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agctctataaatgttgtatcccattaggatctgtctcctccagaagggtactctcttgat 357
Query: 478 atttttgaaatctgtttacttgttttggatgcacaatgatgccaccacagctatgtcaaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 atttttgaaatctgtttacttgttttggatgcacaatgatgccaccacagctatgtcaaa 297
Query: 538 acatcagtggggctggtgccatcagaatggaggatttagaggattgtaatgagcttgggg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 acatcagtggggctggtgccatcagaatggaggatttagaggattgtaatgagcttgggg 237
Query: 598 taccaagtggtgagtttcaattaatttgaaaag 630
|||||||||||||||||||||||||||||||||
Sbjct: 236 taccaagtggtgagtttcaattaatttgaaaag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1031
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1021
Effective search space: 633020
Effective search space used: 633020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_o22.g1 MSMg01no143_o22.g1 CHROMAT_FILE:
MSMg01no143_o22.g1 PHD_FILE: MSMg01no143_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:37 2005
(619 letters)
>mm_chr14_95287098_95288116
Length = 1019
Score = 1162 bits (601), Expect = 0.0
Identities = 614/619 (99%)
Strand = Plus / Plus
Query: 1 ataatgtatacaacacttcaagactctcagttgtagaaatatagctatccctgtccagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataatgtatacaacacttcaagactctcagttgtagaaatatagctatccctgtccagta 260
Query: 61 tagtgaaggctctttatcaattgtcttcattcttcttacaacatttcactcctctttcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtgaaggctctttatcaattgtcttcattcttcttacaacatttcactcctctttcac 320
Query: 121 actcagttttctactcacattgaaaagaaatatttttatttttccatttaaaatggaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actcagttttctactcacattgaaaagaaatatttttatttttccatttaaaatggaaac 380
Query: 181 ctaattagtttctgctcaatttacataatgtgtattttatcttgagttggacatataatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaattagtttctgctcaatttacataatgtgtattttatcttgagttggacatataatt 440
Query: 241 ttatttgaatacttttagctctctaaaagccaatgctagagtaaaactatctatgctata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatttgaatacttttagctctctaaaagccaatgctagagtaaaactatctatgctata 500
Query: 301 actttcaattataattggtttaatattttattttttaagcactgcaccccatggtaaata 360
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 501 actttcaattataattggtttaatattttattttttaagcactgtattccatggtaaata 560
Query: 361 tcccaatataaggcagggtagctggtaggcctgaccaccagtatttaattaaattataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcccaatataaggcagggtagctggtaggcctgaccaccagtatttaattaaattataaa 620
Query: 421 atgtaggcatatgacttgtgactagaaattttaataagccatagcttaatacatttataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgtaggcatatgacttgtgactagaaattttaataagccatagcttaatacatttataa 680
Query: 481 gagggaagtaaaatatagatgtagttccttgaagaanaaatgttggaaaacaaatatttc 540
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 681 gagggaagtaaaatatagatgtagttccttgaagaaaaaatgttggaaaacaaatatttc 740
Query: 541 tcanatttaggtatttataaaaagttctcatggatcaaatataaacaaacttttgaacta 600
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcaaatttaggtatttataaaaagttctcatggatcaaatataaacaaacttttgaacta 800
Query: 601 aattatctcatacaaggtg 619
|||||||||||||||||||
Sbjct: 801 aattatctcatacaaggtg 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
