Query= MSMg01no146_e08.b1 MSMg01no146_e08.b1 CHROMAT_FILE:
MSMg01no146_e08.b1 PHD_FILE: MSMg01no146_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:50 2005
(650 letters)
>mm_chr14_119754289_119755338
Length = 1050
Score = 1172 bits (606), Expect = 0.0
Identities = 639/650 (98%)
Strand = Plus / Minus
Query: 1 cacacctgaccccaaaagtctgaacttttgatagataaataaagatgaagtaaggtaagc 60
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 cacacctgaacataaaagtctgaacttttgatagataaataaagatgaagtaaggtaagc 791
Query: 61 agaaaaaataccgagcatgaatatgtggagtaaattatccaggaaaggttctcagcaggt 120
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 790 agaaaaaatactgagcatgagtatgtggagtaaattatccaggaaaggttctcagcaggt 731
Query: 121 gagctttgcacactcacactatatatacagtcactctcccctggtgagacaatcagtgag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gagctttgcacactcacactatatatacagtcactctcccctggtgagacaatcagtgaa 671
Query: 181 ctcataatgctcccaaagacatcccagctcagaaatgatcatgtctgcacccctccctta 240
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 670 ctcataatgcccccaaagacatcccagctcagaaatgatcatatctgcacccctccctta 611
Query: 241 tcactcactgctatttactaaggcagatctccattagatggtcatttgacgagaccttgg 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 610 tcactcactgctatttactaaggcagatctccattagatggtcacttgacgagaccttgg 551
Query: 301 cactgattgcaacacatactttaatactccttaggtctaatcacatcttagatgcaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 cactgattgcaacacatactttaatactccttaggtctaatcacatcttagatgcaaaga 491
Query: 361 aaggcattttgaatcccattaatgtctaattgaagaactaggaaggaaatatttagaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aaggcattttgaatcccattaatgtctaattgaagaactaggaaggaaatatttagaagc 431
Query: 421 agaggggagcagtgtgctgccctttgctgcttacttattctggatgagatgtagcctcag 480
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 430 agaggggagcagtgtgctggtctttgctgcttacttattctggatgagatgtagcctcag 371
Query: 481 cctgaaacaccatccaccagtgaactccatttctcagcaaggcctgtcgtcataggggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cctgaaacaccatccaccagtgaactccatttctcagcaaggcctgtcgtcataggggag 311
Query: 541 tcagtcaaaaaggagctggtgtaggccaaaagcttgagccaacgctcgaaatgtttgaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tcagtcaaaaaggagctggtgtaggccaaaagcttgagccaacgctcgaaatgtttgaaa 251
Query: 601 gcagaggagtctgtttttaactaaattgtcctggtgccagtcattcaaag 650
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gcagaggagtctgtttttaactaaattgtcctggtgccagtcattcaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no146_e08.g1 MSMg01no146_e08.g1 CHROMAT_FILE:
MSMg01no146_e08.g1 PHD_FILE: MSMg01no146_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:51 2005
(635 letters)
>mm_chr14_119614866_119615900
Length = 1035
Score = 1191 bits (616), Expect = 0.0
Identities = 622/626 (99%), Gaps = 4/626 (0%)
Strand = Plus / Plus
Query: 14 cactgccctggtccgtggttcacccctagcagctattcagaggcagcctctgaatgtgct 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 cactgccctggtccgtggttcacccctagcagctattcagaggcagcctctgaatgtgct 273
Query: 74 tcttccccgccttccagttatttctctacagcagttgcaatcccagcatttgctcgggag 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tcttccccgccttccagttatttctctacagcagttgcaatcccagcatttgctcgggag 333
Query: 134 gaaggaaggacacacacaagtctatttttgaattggcttctgggagctgcaaagtgccac 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gaaggaaggacacacacaagtctatttttgaattggcttctgggagctgcaaagtgccac 393
Query: 194 atgctctggctccagctttcctgatagcccgaggatctcccatgtgactcatctggccta 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 atgctctggctccagctttcctgatagcccgaggatctcccatgtgactcatctggccta 453
Query: 254 aatcaaacagtgccggaagaggccgaatcttgtgcagaacagattggagcattatctgcc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aatcaaacagtgccggaagaggccgaatcttgtgcagaacagattggagcattatctgcc 513
Query: 314 aggccgctgggtcattgactgagctgtggtgctccgtaaagtgtgcaccatcttgaagag 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 aggccgctgggtcattgactgagctgtggtgctccgtaaagtgtgcaccatcttgaagag 573
Query: 374 aggtttatgagacagtctttactgtgtcctcatactaatgctgcattaatcatgctgaaa 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aggtttatgagacagtctttactgtgtcctcatactaatgctgcattaatcatgctgaaa 633
Query: 434 tgtgcaagtacccaagtgttttgtgaataggtaattaattaaaacgttatatgcaagtgt 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tgtgcaagtacccaagtgttttgtgaataggtaattaattaaaacgttatatgcaagtgt 693
Query: 494 cgtgcaatatgtgagaaatttttatggaaatcgttaacatttccatgaaaatttctttgg 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 cgtgcaatatgtgagaaatttttatggaaatcgttaacatttccatgaaaatttctttgg 753
Query: 554 gcctatttataaatacatgcccaaagatgtgatatctctagtatataaataaactctgtg 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 gcctatttataaatacatgcccaaagatgtgatatctctagtatataaataaactctgtg 813
Query: 614 tgtgtgtgtgtgtgt----atatgtg 635
||||||||||||||| |||||||
Sbjct: 814 tgtgtgtgtgtgtgtgtgtatatgtg 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
