Query= MSMg01no147_d11.b1 MSMg01no147_d11.b1 CHROMAT_FILE:
MSMg01no147_d11.b1 PHD_FILE: MSMg01no147_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:45 2005
(272 letters)
>mm_chr14_21021701_21022372
Length = 672
Score = 493 bits (255), Expect = e-144
Identities = 264/267 (98%), Gaps = 1/267 (0%)
Strand = Plus / Plus
Query: 6 ggaattctgtataccacggctggcctcgaactcagacattcgcctgcctctgcctcccaa 65
|||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaactctgtagacca-ggctggcctcgaactcagacattcgcctgcctctgcctcccaa 265
Query: 66 gtgctgggattaaaggcgtgtgccaccacgccgggccctaagtgtgacttcttaaggtag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gtgctgggattaaaggcgtgtgccaccacgccgggccctaagtgtgacttcttaaggtag 325
Query: 126 caaaacaccctaagcaaagcaaggttgtttggaaacagttttgcttagcttgctcttttg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 caaaacaccctaagcaaagcaaggttgtttggaaacagttttgcttagcttgctcttttg 385
Query: 186 gaggcccaaagtccaagaacacatagcatccctgctaggtcccagaatggtggagcttgt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gaggcccaaagtccaagaacacatagcatccctgctaggtcccagaatggtggagcttgt 445
Query: 246 ggtagtgggggagaggggaaagagggg 272
|||||||||||||||||||||||||||
Sbjct: 446 ggtagtgggggagaggggaaagagggg 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 272
Length of database: 672
Length adjustment: 9
Effective length of query: 263
Effective length of database: 663
Effective search space: 174369
Effective search space used: 174369
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no147_d11.g1 MSMg01no147_d11.g1 CHROMAT_FILE:
MSMg01no147_d11.g1 PHD_FILE: MSMg01no147_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:45 2005
(639 letters)
>mm_chr14_21190963_21192001
Length = 1039
Score = 741 bits (383), Expect = 0.0
Identities = 389/391 (99%)
Strand = Plus / Minus
Query: 249 ttcaacattaagtacaattaaaaatgagcttgaggacaaatcatgtttcccagtgaaacc 308
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 ttcaacattaagtataattaaaaatgagcttgaggacaaatcatgtttcccagtgaaacc 980
Query: 309 agtatgaactcttgtagtcttccctgcctctaaaccgtttccattatcatcatttggttc 368
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 979 agtatgaactcttgtagtcttccctgcctctaaatcgtttccattatcatcatttggttc 920
Query: 369 actatctaactcagaggtggtccatctctttataaacaattagcagtgaaccttgttccc 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 actatctaactcagaggtggtccatctctttataaacaattagcagtgaaccttgttccc 860
Query: 429 cattagcaagtcagggtcaagccatggtaatgatttaaagctaagtattttcttcctagt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 cattagcaagtcagggtcaagccatggtaatgatttaaagctaagtattttcttcctagt 800
Query: 489 gattgagaactgtaacaaacagaagctctgaggcctccgagggctctagttagctctgtg 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gattgagaactgtaacaaacagaagctctgaggcctccgagggctctagttagctctgtg 740
Query: 549 tatctttagcatggctgagccaaagtgccctgggtgaggatggcagggaattaagtttta 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tatctttagcatggctgagccaaagtgccctgggtgaggatggcagggaattaagtttta 680
Query: 609 tgtgcaaacaaatgctgaagctcctgcaaga 639
|||||||||||||||||||||||||||||||
Sbjct: 679 tgtgcaaacaaatgctgaagctcctgcaaga 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
