Query= MSMg01no148_f22.b1 MSMg01no148_f22.b1 CHROMAT_FILE:
MSMg01no148_f22.b1 PHD_FILE: MSMg01no148_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:15 2005
(349 letters)
>mm_chr14_118861191_118861939
Length = 749
Score = 636 bits (329), Expect = 0.0
Identities = 344/349 (98%)
Strand = Plus / Plus
Query: 1 ttctaaaactaacaatagctctttgggggaaccggtgggaattgtgaaacctcttgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctaaaactaacaatagctctttgggggaaccggtgggaattgtgaaacctcttgtttt 260
Query: 61 ccagaaaagactcagtaggggaaatttgaagcttccctctgcggatgtgcacagtgagta 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 ccagaaaagactcagtaggggaaatttgaagcttccctctccggatgtgcacagtgagta 320
Query: 121 cagccgtcagctgcctcacctgtctgagtggctacggaggtgaatcccagagacatgaat 180
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 cagctgtcagctgcctcacctgtctgagtggctacggaggtgaatcccagaggcatgaat 380
Query: 181 ggaggcttgccaagagattccgcactgtagctctgccctcaaatgcccctcaggtagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaggcttgccaagagattccgcactgtagctctgccctcaaatgcccctcaggtagagg 440
Query: 241 gtggggactggaaaatgtttgcacatgataactttccattaactcattgtctggggtgca 300
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 gtggggactggaaaacgtttgcacgtgataactttccattaactcattgtctggggtgca 500
Query: 301 gttcccacagtcagttgggctgtttgggccactgtagaattgactatca 349
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttcccacagtcagttgggctgtttgggccactgtagaattgactatca 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_f22.g1 MSMg01no148_f22.g1 CHROMAT_FILE:
MSMg01no148_f22.g1 PHD_FILE: MSMg01no148_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:15 2005
(598 letters)
>mm_chr14_118973888_118974887
Length = 1000
Score = 766 bits (396), Expect = 0.0
Identities = 424/434 (97%), Gaps = 2/434 (0%)
Strand = Plus / Minus
Query: 160 agactttgtgtagctgcagggtggttgggagggtgcatgtgcccgtgtgtgtatgcacaa 219
||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||
Sbjct: 1000 agactttgtgtagctgcagagtggttgggagggtgcgtgtgcccgtgtgtgtatacacaa 941
Query: 220 gcatacggaggccagaggtcaacattggctgacttctgcagttgctctccaccctagttt 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 gcatacggaggccagaggtcaacattggctgacttctgcagttgctctccaccctagttt 881
Query: 280 ttgagacagagtctcaggagcctggatctcagccatctagccaggctacctggccagcaa 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 ttgagacagagtctcaggagcctggatctcagccatctagccaggctacctggccagcaa 821
Query: 340 aacacagggatccttctgccgcctctcttgcctaacttatcacttca--ctctttcctgc 397
||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||
Sbjct: 820 aacacagggatccttctgctgcctctcttgcctaacttaccacttcaagctctttcctgc 761
Query: 398 tgagccatctctctagtccccaagagaaaactgaatcacttgccaggctttaatgtgttt 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 tgagccatctctctagtccccaagagaaaactgaatcacttgccaggctttaatgtgttt 701
Query: 458 gtgaattccttggtggcccttcacttgctatgggactctctgctgactcttgttcagctt 517
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 700 atgaattccttggtggcccttcacttgttatgggactctctgctgactcttgttcagctt 641
Query: 518 ctggggccaaaggccatcttcggttctcagcaggtagacaccttccctcatgacagcgag 577
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ctggggccaaaggccatctttggttctcagcaggtagacaccttccctcatgacagcgag 581
Query: 578 ctccatcatcagca 591
||||||||||||||
Sbjct: 580 ctccatcatcagca 567
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 1000
Length adjustment: 10
Effective length of query: 588
Effective length of database: 990
Effective search space: 582120
Effective search space used: 582120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
