Query= MSMg01no149_c19.b1 MSMg01no149_c19.b1 CHROMAT_FILE:
MSMg01no149_c19.b1 PHD_FILE: MSMg01no149_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:21 2005
(651 letters)
>mm_chr14_56013820_56014871
Length = 1052
Score = 1220 bits (631), Expect = 0.0
Identities = 646/651 (99%), Gaps = 1/651 (0%)
Strand = Plus / Plus
Query: 1 cgtttgc-catcgcatgtcccagacatagacggtgttccctgggagacctcaagaatgaa 59
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgtttgcacatcgcatgtcccagacatagacggtgttccctgggagacctcaagaatgaa 260
Query: 60 tcctctcttggctgaaaaaagagaaagactctggcaaaggggaaatcgcattgttgggaa 119
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 tcctctcttggctgaaaaaagagaaagactatggcaaaggggaaatcgcattgttgggaa 320
Query: 120 gcttacgggtctttgtgagcaaacaatgactactgggaaagagtttccaggaccagtgtc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttacgggtctttgtgagcaaacaatgactactgggaaagagtttccaggaccagtgtc 380
Query: 180 ccctattatcaatgaaacaatagaaaatcaaaatgggctttctgtacacaaaggataaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctattatcaatgaaacaatagaaaatcaaaatgggctttctgtacacaaaggataaac 440
Query: 240 aggctgagaaagaaattaggtaaacaacacccttctcaatagtcacaaataatataaaat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggctgagaaagaaattaggtaaacaacacccttctcaatagtcacaaataatataaaat 500
Query: 300 accttggcgtgactctaactaaggaagtgaaagatctgtatgatgagaacttgaagtctc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accttggcgtgactctaactaaggaagtgaaagatctgtatgatgagaacttgaagtctc 560
Query: 360 tgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatgctcatggattg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatgctcatggattg 620
Query: 420 acaggatcaatatagtaaaaatggctatcttgccaaaagcaatctacagattcaatgcaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acaggatcaatatagtaaaaatggctatcttgccaaaagcaatctacagattcaatgcaa 680
Query: 480 tccccatcaaaattccaactcaattcttcaacgaattggaaagggcaatctgcaaattca 539
||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||
Sbjct: 681 tccccatcaaaattccaactcaattcttcaacgaattagaaagggcaatcggcagattca 740
Query: 540 tctggaataacaaaaaatctaggatagcaaaaactcttctcaaggataaaagaacctctg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctggaataacaaaaaatctaggatagcaaaaactcttctcaaggataaaagaacctctg 800
Query: 600 gtggaatcaccatgcctgacctaaagctgtactacagagcaattgtgataa 650
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gtggaatcaccatgcctgacctaaagctgtactacagagcaattgtgataa 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1052
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1042
Effective search space: 667922
Effective search space used: 667922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_c19.g1 MSMg01no149_c19.g1 CHROMAT_FILE:
MSMg01no149_c19.g1 PHD_FILE: MSMg01no149_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:21 2005
(504 letters)
>mm_chr14_56171198_56172101
Length = 904
Score = 721 bits (373), Expect = 0.0
Identities = 391/397 (98%)
Strand = Plus / Minus
Query: 1 cactagcttctgtaacacattttctgtaacaccaatctggggtgtaggaaaccttatctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cactagcttctgtaacacattttctgtaacaccaatctggggtgtaggaaaccttatctc 338
Query: 61 aagcaaacatacaaactccaaacaaaaagcaagccaataaacaagtctaaaaactcaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aagcaaacatacaaactccaaacaaaaagcaagccaataaacaagtctaaaaactcaaaa 278
Query: 121 tttctttatcatgactctttttatctgctatgtgggccaattttattggcaaaagttgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tttctttatcatgactctttttatctgctatgtgggccaattttattggcaaaagttgtg 218
Query: 181 tttaagacgaagactttggggcgggagagatgggctcagcagttaagagcatcgaatgct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 217 tttaagacgaagactttggggcgggagagatgggctcagcagttaagagcattgaatgct 158
Query: 241 cttctagaggtcttgagttcaaatcccagtgaccacatggtggctcacaaccatctgtaa 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 cttctagaggtcctgagttcaaatcccagtgaccacatggtggctcacaaccatctgtaa 98
Query: 301 tgagatctgatgccctcttctggtgtgactgaagacagctacagcgcacttagatataat 360
||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct: 97 tgagatctgatgccctcttctggtgtgtctgaagacagctacagtgtacttagatataat 38
Query: 361 aaataaatcttagccaggcagtggtggcgcacacctt 397
||||||||||||||||||||||||||| |||||||||
Sbjct: 37 aaataaatcttagccaggcagtggtggtgcacacctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
