Query= MSMg01no149_e11.b1 MSMg01no149_e11.b1 CHROMAT_FILE:
MSMg01no149_e11.b1 PHD_FILE: MSMg01no149_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:29 2005
(235 letters)
>mm_chr14_80600263_80600896
Length = 634
Score = 400 bits (207), Expect = e-116
Identities = 228/235 (97%), Gaps = 1/235 (0%)
Strand = Plus / Plus
Query: 1 agtgcctatttgacaacgatagagaggacagaggccacagagaatgggttctatcaagct 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 agtgcctatttgacaacgatagagaggacagaggccacagaga-tgggttctatcaagct 259
Query: 61 cagtgtgttgcaccagtgagcttcttggggtcaatcacccaagtatgagtgattcttggg 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 260 cagtgtgttgcaccagtgagcttcttggggtcagtcacccaagtatgagtgattcttggg 319
Query: 121 cagctgcacaaccaggaaatctcaacccagcatgagtgattcacaaaccaccactgagga 180
||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||
Sbjct: 320 cagctgcacaaccaggaaatctcaacccagcctgagtgattcataaaccaccaatgagga 379
Query: 181 atttccatctcagtcaatcatgcatttcctttatattctagcaagtcaagaccag 235
|||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 380 atttccatctcagtcagtcatgcatttccttgatattctagcaagtcaagaccag 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 634
Length adjustment: 9
Effective length of query: 226
Effective length of database: 625
Effective search space: 141250
Effective search space used: 141250
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no149_e11.g1 MSMg01no149_e11.g1 CHROMAT_FILE:
MSMg01no149_e11.g1 PHD_FILE: MSMg01no149_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:29 2005
(187 letters)
>mm_chr14_80736830_80737416
Length = 587
Score = 300 bits (155), Expect = 4e-86
Identities = 185/209 (88%), Gaps = 22/209 (10%)
Strand = Plus / Minus
Query: 1 aggacagccagggctacatagtgtcttaaaatataaaaaaatagtaagtaaata------ 54
||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 484 aggacagccagggctacatagtgtcttaaaaaataaaaaaatagtaagtaaataagagag 425
Query: 55 ----------------agagagagagagagagagagacttagaatttgccatgaaactat 98
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 agagagagagagagagagagagagagagagagagagacttagaatttgccatgaaactat 365
Query: 99 ttaaaagatcaatcacaatgcagcaatgcaaaaatctatattttggtgtgaaaagacaaa 158
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttaaaagatcaataacaatgcagcaatgcaaaaatctatattttggtgtgaaaagacaaa 305
Query: 159 ggaggacaaagtaatggcctgtttgttgt 187
|||||||||||||||||||||||||||||
Sbjct: 304 ggaggacaaagtaatggcctgtttgttgt 276
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 587
Length adjustment: 8
Effective length of query: 179
Effective length of database: 579
Effective search space: 103641
Effective search space used: 103641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
