Query= MSMg01no151_f09.b1 MSMg01no151_f09.b1 CHROMAT_FILE:
MSMg01no151_f09.b1 PHD_FILE: MSMg01no151_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:07 2005
(668 letters)
>mm_chr14_22115360_22116428
Length = 1069
Score = 1212 bits (627), Expect = 0.0
Identities = 657/667 (98%), Gaps = 3/667 (0%)
Strand = Plus / Plus
Query: 4 ggaattcatttactacccattggttgtt-cctaaagttgtaataatgacatcataatatc 62
||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatttactagacattggttgtttcctaaagttgtaataatgacatcataatatc 263
Query: 63 aggaccatgaaaatagtggaaccaaataaagaacttagaaatgtaacaggcaacttcagt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aggaccatgaaaatagtggaaccaaataaagaacttagaaatgtaacaggcaacttcagt 323
Query: 123 tttgaataatgtattaaatgtgccacttcaataaatatttaaactataaatgaaaatgta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttgaataatgtattaaatgtgccacttcaataaatatttaaactataaatgaaaatgta 383
Query: 183 ttctattctttcaatcaagttatttacgtagaagtcagagtattacagttgtaaggtcag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttctattctttcaatcaagttatttacgtagaagtcagagtattacagttgtaaggtcag 443
Query: 243 atgtcagttcagagtcctcaaatgtttgtctcacaaggattcttcaatcatccaggctct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atgtcagttcagagtcctcaaatgtttgtctcacaaggattcttcaatcatccaggctct 503
Query: 303 taagtatctgtaaaactacttcccaggatcatggtgagggttagaaataccaggtgtaat 362
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 504 taagtatctgtaaaactacttcccaggatcatggtaagggttagaaataccaggtgtaat 563
Query: 363 cctgcatgccacc-gttgtgcccttgatagtgggaatctcatgtacgtttcttggaaaca 421
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cctgcatgt-acgtgttgtgcccttgatagtgggaatctcatgtacgtttcttggaaaca 622
Query: 422 caaaaggtattttttgtttgtttgttttttgagacagggtttctctgtgtagccctggct 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 caaaaggtattttttgtttgtttgttttttgagacagggtttctctgtgtagccctggct 682
Query: 482 gtcctggaactcactttgtagaccagactgtcctcgaactcagaaatccacctgccttct 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtcctggaactcactttgtagaccagactgtcctcgaactcagaaatccacctgccttct 742
Query: 542 gcctccaaagtgctgggattaaaggcgtgtgccaccactgcctggctacaaaaggtattt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gcctccaaagtgctgggattaaaggcgtgtgccaccactgcctggctacaaaaggtattt 802
Query: 602 ttattcttgaacatttcatgattcacagatctgtgcgcattatggattattatgcgtatc 661
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 803 ttattcttgaacatttcatgattcacagatctgtgtgcattatggattattatgcttatc 862
Query: 662 atttaag 668
|||||||
Sbjct: 863 atttaag 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1069
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1059
Effective search space: 696822
Effective search space used: 696822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_f09.g1 MSMg01no151_f09.g1 CHROMAT_FILE:
MSMg01no151_f09.g1 PHD_FILE: MSMg01no151_f09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:07 2005
(336 letters)
>mm_chr14_22267355_22268090
Length = 736
Score = 615 bits (318), Expect = e-180
Identities = 333/340 (97%), Gaps = 4/340 (1%)
Strand = Plus / Minus
Query: 1 caggccagacagagctacacagtgggatcttatcc----caaacaaagtttacatatgat 56
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 722 caggccagacagagctacacagtgggatcttatcccaaacaaacaaagtttacatatgat 663
Query: 57 ctagtaattccactcttactgtctacctggaagaaatgaaaacacacacacaaaaagagt 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ctagtaattccactcttactgtctacctggaagaaatgaaaacacacacacaaaaagagt 603
Query: 117 gctaactggttgcttataatgttattgtatgtatatgtatatattatgtatatttatgta 176
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 602 gctaactggttgcttataatgttattgtatgtgtatgtatatattatgtatatttatgta 543
Query: 177 taatgttctatatttttacctcaccccatcaataaaatcacatagggcccagtactaaat 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 taatgttctatatttttacctcaccccatcaataaaatcacatagggcccagtactaaat 483
Query: 237 aatactctttcttccttattgagcataagcaagacagaaaaaaaatccctatatggcaat 296
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 482 aacactctttcttccttattgagcacaagcaagacagaaaaaaaatccctatatggcaat 423
Query: 297 ttttttatttgtatcaaattatagagtaccatcagtaagc 336
||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttttttatttgtatcaaattatagagtaccatcagtaagc 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
