Query= MSMg01no151_h11.b1 MSMg01no151_h11.b1 CHROMAT_FILE:
MSMg01no151_h11.b1 PHD_FILE: MSMg01no151_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:16 2005
(371 letters)
>mm_chr14_80018898_80019668
Length = 771
Score = 659 bits (341), Expect = 0.0
Identities = 362/369 (98%), Gaps = 2/369 (0%)
Strand = Plus / Plus
Query: 4 ggaattcatactttctcac-atcttttgaacttctacgaggttgcctttcatggtttatg 62
||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatactt-ctccccatcttttgaacttctacgaggttgcctttcatggtttatg 262
Query: 63 gcgtgcatgctactgtcttagtgagtggattaagtagaacttcaagttggatcagcttgt 122
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gtgtgcatgctactgtcttagtgagtggattaagtagaacttcaagttggatcagcttgt 322
Query: 123 gctaagagataaaggcctctttgttcaaagtgcacaaatgcccaggttacagtggctttc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gctaagagataaaggcctctttgttcaaagtgcacaaatgcccaggttacagtggctttc 382
Query: 183 aataaatgtaagttctagtatgtggtgctcttcaggtgaaacaagtatctttttaataag 242
||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 383 aataaatgtaagtgctagtatatggtgctcttcaggtgaaacaaggatctttttaataag 442
Query: 243 agtaaaatttttataattcttcagatctaactttgtataatgtaggcaaactatcaaaga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agtaaaatttttataattcttcagatctaactttgtataatgtaggcaaactatcaaaga 502
Query: 303 cacttaattcttaaaaactttgattagttatgaaaattgcatttttgctgttttatgtat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cacttaattcttaaaaactttgattagttatgaaaattgcatttttgctgttttatgtat 562
Query: 363 cttaggttg 371
|||||||||
Sbjct: 563 cttaggttg 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_h11.g1 MSMg01no151_h11.g1 CHROMAT_FILE:
MSMg01no151_h11.g1 PHD_FILE: MSMg01no151_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:16 2005
(626 letters)
>mm_chr14_80149735_80150760
Length = 1026
Score = 1187 bits (614), Expect = 0.0
Identities = 623/626 (99%)
Strand = Plus / Minus
Query: 1 caccctctgaagttagtctattttcctcttgttatcctaggcccctttaaattctaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 caccctctgaagttagtctattttcctcttgttatcctaggcccctttaaattctaatat 767
Query: 61 tacaagtcagcctccagtgtgctatgagatgcaggactagaattaggagatgtttttaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 tacaagtcagcctccagtgtgctatgagatgcaggactagaattaggagatgtttttaat 707
Query: 121 aataaagcagtagccacctcccattcctgggatagaaagcagtaaaaattcacacacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 aataaagcagtagccacctcccattcctgggatagaaagcagtaaaaattcacacacaga 647
Query: 181 aaagctcagaataatcagagctaagatgtccagctgaccctcccaggcagggatctcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 aaagctcagaataatcagagctaagatgtccagctgaccctcccaggcagggatctcctt 587
Query: 241 ctccatagccaagagtagaagattaatattacattaaagtaaaatggcacttcccctaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ctccatagccaagagtagaagattaatattacattaaagtaaaatggcacttcccctaga 527
Query: 301 tgtaggccccagtcctcaaaaacatgacaacctaattaaagggataaaacaaatatgcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tgtaggccccagtcctcaaaaacatgacaacctaattaaagggataaaacaaatatgcag 467
Query: 361 aataaaaactggaacagatgacagcatctaattaagtgctaaattaatctgaaaccagat 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 466 aataaaaactggaacagatgacagtatctaattaagtgctaaattaatctgaaaccagat 407
Query: 421 tgaactttttaaaatttctcttagatgatttagaaatacttttgggtctgcagtgcctct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tgaactttttaaaatttctcttagatgatttagaaatacttttgggtctgcagtgcctct 347
Query: 481 gggtcataattaagaacagtaattattattgtactcctgatgtcacagcgttccgaggta 540
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 346 gggtcataattaagaacagtaattattattgtactcctgatgtcacggcgttcctaggta 287
Query: 541 agttctctcacatctcaatttggcaagctttctccctctccagtaatcctggctttgact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agttctctcacatctcaatttggcaagctttctccctctccagtaatcctggctttgact 227
Query: 601 ctcggttctctcctacacccacataa 626
||||||||||||||||||||||||||
Sbjct: 226 ctcggttctctcctacacccacataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
