Query= MSMg01no151_j07.b1 MSMg01no151_j07.b1 CHROMAT_FILE:
MSMg01no151_j07.b1 PHD_FILE: MSMg01no151_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:25 2005
(676 letters)
>mm_chr14_80904363_80905438
Length = 1076
Score = 1205 bits (623), Expect = 0.0
Identities = 661/679 (97%), Gaps = 10/679 (1%)
Strand = Plus / Minus
Query: 5 gaattcaatactttccacttaacaaggtgaaat-------gcctttaaagacagagacta 57
|||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 1021 gaattcaatactttagacttaacaaggtgaaatgagagaagcctttaaagacagagacta 962
Query: 58 agcgctgatgaacccccagagtctttgatctttgtagatcaccaaatgtcattatgcctc 117
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 agcgc---tgaacccccagagtctttgatctttgtagatcaccaaatgtcattatgcctc 905
Query: 118 agtttctctgtctgtaaaatggacataaggtagccaattttgatgattacatatagaagt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 agtttctctgtctgtaaaatggacataaggtagccaattttgatgattacatatagaagt 845
Query: 178 gctttggaactcagacaataaaaatacctatgactaggtacctcagaatctgagttggta 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 gctttggaactcagacaataaaaatacctatgactaggtacctcagaatctgagttggta 785
Query: 238 attctatttctctttctttatttcaacatcaatgatggcatataacacaggtgtcacata 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 attctatttctctttctttatttcaacatcaatgatggcatataacacaggtgtcacata 725
Query: 298 aagatgtagagtgagactgaggttagaaaaatgctttcttagggacagcaaaaactactc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 aagatgtagagtgagactgaggttagaaaaatgctttcttagggacagcaaaaactactc 665
Query: 358 tcaaaattcacaaccacgtactcttggcatactattctctcagggcatttagagcaagta 417
|||||||||| || | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tcaaaattcagaaataggtactcttggcatactattctctcagggcatttagagcaagta 605
Query: 418 ggtcttgactttagctgtatacctctggcctacacaagtttcgaaaagcaaatttcattt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ggtcttgactttagctgtatacctctggcctacacaagtttcgaaaagcaaatttcattt 545
Query: 478 taattaattcacagtactttgtggaaagaggggaaacacgaggttttgtacatgctaggc 537
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 544 taattaattcacagtactttgtggatagaggggaaacatgaggttttgtacatgctaggc 485
Query: 538 aactgtgccactactgaaaaatatggctttttcttctgttctttgggggtcaacttagtc 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aactgtgccactactgaaaaatatggctttttcttctgttctttgggggtcaacttagtc 425
Query: 598 cccacagtacttcttaacactttttttcccctgtgtatcaaaccctggccacagcctgaa 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cccacagtacttcttaacactttttttcccctgtgtatcaaaccctggccacagcctgaa 365
Query: 658 tagctttctgtatttaaga 676
|||||||||||||||||||
Sbjct: 364 tagctttctgtatttaaga 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_j07.g1 MSMg01no151_j07.g1 CHROMAT_FILE:
MSMg01no151_j07.g1 PHD_FILE: MSMg01no151_j07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:25 2005
(586 letters)
>mm_chr14_80758134_80759119
Length = 986
Score = 990 bits (512), Expect = 0.0
Identities = 560/586 (95%), Gaps = 17/586 (2%)
Strand = Plus / Plus
Query: 1 gtgtgatctcagttctcccatcaagatccagatgaaggattgtggaaattagaatgggaa 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgtgatctcagttctcccatcgagatccagatgaaggattgtggaaattagaatgggaa 260
Query: 61 cctcttccaccagtcatttcacggtttccttggttttctgcaggtatttcaaaaagagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctcttccaccagtcatttcacggtttccttggttttctgcaggtatttcaaaaagagga 320
Query: 121 ctggagtggttttactacagctatgctcactgagaatcatcttattcagcttctgttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctggagtggttttactacagctatgctcactgagaatcatcttattcagcttctgttttc 380
Query: 181 agctctttccgaaaaatctctctctctctctctctctctctctctctctctctctctctc 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctctttccggaaaatctctctctctctctctctctctctctctctctctctctctctc 440
Query: 241 tctctctctctctctcctctctctctctccccatgtgtgaggtgcgctgtgctgagatgg 300
|| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 tc----------------ctctctctctccccatgtgtgtggtgcgctgtgctgagatgg 484
Query: 301 tacccttggccttccacatgccaaggaaatgctccatcacccactctattaccatcttaa 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 485 tacccttggccttccacatgccaaggaaatgctccatcattgactctattaccatcttaa 544
Query: 361 ttagaagggtgaaatgtcatagatgctattttcttgactcttggatttctaaatccaaaa 420
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 545 ttagaagggtgaaatatcatagatgctattttcttaactcttggatttctaaatccaaaa 604
Query: 421 ataattacactaataaagagaattgtttcctcaagaaaatgaattaactaagattacacc 480
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 605 ataattacactaataa-gagaattgtttcctcaagaaaatgaattaactaagattaaacc 663
Query: 481 cattgtctagtgatagcatgaacttgatcaggaatgggttacttttaattgagttgttgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 cattgtctagtgatagcatgaacttgatcaggaatgggttacttttaattgagttgttgg 723
Query: 541 ccaaaggggcccaatggaaacctccaaactcaggctgttggcaggg 586
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ccaaaggggcccaatggaaacctccaaactcaggctgttggcaggg 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 84
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
