Query= MSMg01no153_e12.b1 MSMg01no153_e12.b1 CHROMAT_FILE:
MSMg01no153_e12.b1 PHD_FILE: MSMg01no153_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:37 2005
(481 letters)
>mm_chr14_86509923_86510803
Length = 881
Score = 864 bits (447), Expect = 0.0
Identities = 472/481 (98%), Gaps = 3/481 (0%)
Strand = Plus / Plus
Query: 1 acatgtttactgtgatatataatagtgtgactagaactagaagtcagatcccctcatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatgtttactgtgatatataatagtgtgactagaactagaagtcagatcccctcatggt 260
Query: 61 ctatgaacagcttggggaattttccctttgctgtgttctacatggatgttgttcatgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatgaacagcttggggaattttccctttgctgtgttctacatggatgttgttcatgaat 320
Query: 121 ctcaagtcagtaagctctttcaaacactttttcctttattcagaatattatattttattt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcaagtcagtaagctctttcaaacactttttcctttattcagaatattatattttattc 380
Query: 181 gagtatccttatttttaaaaaatgttttacatttacatacaattgcatattttccccctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagtatccttatttttaaaaaatgttttacatttacatacaattgcatattttccccctt 440
Query: 241 attcttttttccctccaaagcttcccatgctctcatgactctcaagtctatagggctttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 attcttttttccctccaaagcttcccatgctctcatgactctcaagtctataggg--ttt 498
Query: 301 tttttctttactattattgttgtgtgtaggcaagcagaggcacatccagctgactccatc 360
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 499 tttttctttactagtattgttgtgtgtaggcaggcagaggcacatccagctgactccatc 558
Query: 361 tttgtcatttgtgtatatatgatgaccactctgtattgtacaaccaatatgggggtctca 420
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 559 tttgtcatttgtgtatatatgatgaccactctgtattggacaaccaatatgggg-tctca 617
Query: 421 accttggaagttaatttttatcctttcagcagtcaatatttacctgcgttttcgcctagg 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 618 accttggaagttaatttttatcctttcagcagtcaatatttacctgcattttcacctagg 677
Query: 481 a 481
|
Sbjct: 678 a 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_e12.g1 MSMg01no153_e12.g1 CHROMAT_FILE:
MSMg01no153_e12.g1 PHD_FILE: MSMg01no153_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:37 2005
(516 letters)
>mm_chr14_86682454_86683368
Length = 915
Score = 928 bits (480), Expect = 0.0
Identities = 507/516 (98%), Gaps = 1/516 (0%)
Strand = Plus / Minus
Query: 1 cttaggaaatcaaatatatttcctgttcatatatcttttccaagtgtgttattaaatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 cttaggaaatcaaatatatttcctgttcatatatcttttccaagtgtgttattaaatgta 656
Query: 61 cttctctttggagagtcctttttcaccctaagctcctggaaggaggttgtgcctactctg 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cttctctttggagaatcctttttcaccctaagctcctggaaggaggttgtgcctactctg 596
Query: 121 tggaaattcacgtgtactgggtcacagtgacattgagttatattgtttctggtttcccct 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 595 tggaaattcacgtgtactgggtcacagtgacattgcgttatattgtttctggtttcccct 536
Query: 181 cccattcttttacattcttgtgatttaagaagttagtatttgcaggtctgactaatgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cccattcttttacattcttgtgatttaagaagttagtatttgcaggtctgactaatgttt 476
Query: 241 gtatctcactatagtgtagctttccagagagtagcagtcccaatcactccatctcctctc 300
||||||||||| |||| |||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 475 gtatctcactagagtgcagctttccagagagtaacagtcccaatcattccatctcctctc 416
Query: 301 atatccccagtctcaaattcagtactgtatatgagtagttgcatagtaatatatttcttt 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 415 atatccccagtctcaaattcagtactgtatatgagtagttgcaaagtaatatatttcttt 356
Query: 361 tcaggttaaacgaatgcttaaagaaatatttggctcatttctatcttttttttaaaatat 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 355 tcaggttaaacaaatgcttaaagaaatatttggctcatttctatctttttttt-aaatat 297
Query: 421 attttctaagaatacattttaatctgttttgaaggcagaacacattatctcctgggttgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 attttctaagaatacattttaatctgttttgaaggcagaacacattatctcctgggttgg 237
Query: 481 taatatgaccatggtgtctgcaaaaaacaaatggtt 516
||||||||||||||||||||||||||||||||||||
Sbjct: 236 taatatgaccatggtgtctgcaaaaaacaaatggtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 915
Length adjustment: 10
Effective length of query: 506
Effective length of database: 905
Effective search space: 457930
Effective search space used: 457930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
