Query= MSMg01no154_i08.b1 MSMg01no154_i08.b1 CHROMAT_FILE:
MSMg01no154_i08.b1 PHD_FILE: MSMg01no154_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:10 2005
(434 letters)
>mm_chr14_48938075_48938909
Length = 835
Score = 808 bits (418), Expect = 0.0
Identities = 427/430 (99%), Gaps = 1/430 (0%)
Strand = Plus / Minus
Query: 6 gaattcagtttgcgaccgc-gcacagcagttcgggaggtatcgccaaggagccttggcct 64
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 gaattcagtttgcgaaagcagcacagcagttcgggaggtatcgccaaggagccttggcct 576
Query: 65 gtccttttgtttaacgaagatgccattttccaagtgtgtgagaatcccagatacacaccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gtccttttgtttaacgaagatgccattttccaagtgtgtgagaatcccagatacacaccc 516
Query: 125 aaactgggaacacacactcagtgttagagcaccagcagcccagagaaagctactccttag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aaactgggaacacacactcagtgttagagcaccagcagcccagagaaagctactccttag 456
Query: 185 caagctcaaagcaggtgcccagagcagggcactggcgacaaggacagtgcacagctcaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 caagctcaaagcaggtgcccagagcagggcactggcgacaaggacagtgcacagctcaac 396
Query: 245 acatactcttcccctacctactcttttcttacttgagcatagctgaaatggggcgtcctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 acatactcttcccctacctactcttttcttacttgagcatagctgaaatggggcgtcctg 336
Query: 305 ctgagcaagtttttccaaactattagccaatgtggttagtaactgggatgcatttgttcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ctgagcaagtttttccaaactattagccaatgtggttagtaactgggatgcatttgttcc 276
Query: 365 tgttaagacacagtttctagaagcagctgacttgagactaatgtaagtgtgatatataaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tgttaagacacagtttctagaagcagctgacttgagactaatgtaagtgtgatatataaa 216
Query: 425 ggtctttggc 434
||||||||||
Sbjct: 215 ggtctttggc 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 835
Length adjustment: 9
Effective length of query: 425
Effective length of database: 826
Effective search space: 351050
Effective search space used: 351050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_i08.g1 MSMg01no154_i08.g1 CHROMAT_FILE:
MSMg01no154_i08.g1 PHD_FILE: MSMg01no154_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:10 2005
(222 letters)
>mm_chr14_48782186_48782806
Length = 621
Score = 422 bits (218), Expect = e-122
Identities = 221/222 (99%), Gaps = 1/222 (0%)
Strand = Plus / Plus
Query: 1 cgcctttctgcctgggcctaccatagcaaaggcgctgcgctagcctaactcgacagggac 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 cgcctttctgcctgggcctaccatagcaaaggcgctgcgctagcctaact-gacagggac 259
Query: 61 gctttcggtgcctactgtgtgtctctggtacaccgtgccaggtgcctcgacttctccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gctttcggtgcctactgtgtgtctctggtacaccgtgccaggtgcctcgacttctccaag 319
Query: 121 cctgtcacagttctctaggggtaatgggaccagatgggagggagaagggaggagagctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cctgtcacagttctctaggggtaatgggaccagatgggagggagaagggaggagagctgg 379
Query: 181 ttgttagaagctggtagttcgggacctgaaatggtttgggca 222
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttgttagaagctggtagttcgggacctgaaatggtttgggca 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 621
Length adjustment: 9
Effective length of query: 213
Effective length of database: 612
Effective search space: 130356
Effective search space used: 130356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
