Query= MSMg01no154_n01.b1 MSMg01no154_n01.b1 CHROMAT_FILE:
MSMg01no154_n01.b1 PHD_FILE: MSMg01no154_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:33 2005
(641 letters)
>mm_chr14_63289461_63290501
Length = 1041
Score = 1232 bits (637), Expect = 0.0
Identities = 640/641 (99%)
Strand = Plus / Plus
Query: 1 cacacggcacaactccagtcaaggtgtcggaatggagctggcctgcaccctgttcatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacacggcacaactccagtcaaggtgtcggaatggagctggcctgcaccctgttcatgca 260
Query: 61 aaccggaacatccctgtctccctgctttgtggagcaggtctcccggtgggccaacagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaccggaacatccctgtctccctgctttgtggagcaggtctcccggtgggccaacagcag 320
Query: 121 tctggaggcagctgacttcagcgagcctaacagcactaccacggaggcctccaaagtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctggaggcagctgacttcagcgagcctaacagcactaccacggaggcctccaaagtcac 380
Query: 181 atccagacagagcacaggtaaaggaaaaccaccctcctcagcaaggctaagggctcaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atccagacagagcacaggtaaaggaaaaccaccctcctcagcaaggctaagggctcaaag 440
Query: 241 aaatagtgccagccatcatttgtcagaagccatggtaagttcggggtgccctgaattgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatagtgccagccatcatttgtcagaagccatggtaagttcggggtgccctgaattgca 500
Query: 301 gcagacgttgagatagcagacctacccttgaatgtcatgcatgatgtgtgtcctctctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcagacgttgagatagcagacctacccttgaatgtcatgcatgatgtgtgtcctctctat 560
Query: 361 tcctccctttttgcgccttagcacaagaacacatgtacatgcacacacacacacctatcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctccctttttgcgccttagcacaagaacacatgtacatgcacacacacacacctatcc 620
Query: 421 ttgagcatacacagaaaggtactcctcagagcctaccacctatggacatacccggcagga 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgagcacacacagaaaggtactcctcagagcctaccacctatggacatacccggcagga 680
Query: 481 tttgtcccaggccactgtccctaggccatttttcactaaccccatgtgacagcaaaatgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttgtcccaggccactgtccctaggccatttttcactaaccccatgtgacagcaaaatgt 740
Query: 541 agcagggggcaggaaaagtagtttctgggaaagtcaggttaaagaaagacacacaaaagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agcagggggcaggaaaagtagtttctgggaaagtcaggttaaagaaagacacacaaaagg 800
Query: 601 gacaagttacactccatgtctcccttggttctgttggaagc 641
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gacaagttacactccatgtctcccttggttctgttggaagc 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_n01.g1 MSMg01no154_n01.g1 CHROMAT_FILE:
MSMg01no154_n01.g1 PHD_FILE: MSMg01no154_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:33 2005
(617 letters)
>mm_chr14_63409239_63410255
Length = 1017
Score = 553 bits (286), Expect = e-161
Identities = 302/310 (97%), Gaps = 5/310 (1%)
Strand = Plus / Minus
Query: 313 cacagaacaaaacaaaacattaaagaaaatgccccacagacttgcctacagactagtgtg 372
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1017 cacagaacaaaacaaaacattaaagaaaatgccccccagacttgcctacagactagtgtg 958
Query: 373 ctagaggtattttctaaattgaggtttcctattcccagatgatctgaatttattatgtca 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 ctagaggtattttctaaattgaggtttcctattcccagatgatctgaatttattatgtca 898
Query: 433 agttgacaaaaaaactaaccagcacaggaacttaaaaatatctctg-----gaaaaaaaa 487
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 897 agttgacaaaaaaactaaccagcacaggaacttaaaaatatctctgaaaaaaaaaaaaaa 838
Query: 488 aaaaaaaaaaaaaaaaaaaacctccacagtattaggtctatagaagatataaaatcaagg 547
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 837 aaaaaaaaaaaaaaaaaaaacctccacagtattaggtctatagaagatataaaatcaaag 778
Query: 548 aaggttataagggacatgattagaaaaagcttccaatatggaccaagaaatgttgtatgg 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 aaggttataagggacatgattagaaaaagcttccaatatggaccaagaaatgttgtatgg 718
Query: 608 gacagggtaa 617
||||||||||
Sbjct: 717 gacagggtaa 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
