Query= MSMg01no155_n06.b1 MSMg01no155_n06.b1 CHROMAT_FILE:
MSMg01no155_n06.b1 PHD_FILE: MSMg01no155_n06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:49 2005
(570 letters)
>mm_chr14_86449930_86450899
Length = 970
Score = 1009 bits (522), Expect = 0.0
Identities = 555/566 (98%)
Strand = Plus / Plus
Query: 5 gaattctctcctctacgctttatagaacatagtactgccaaaaacttgatttcagacttc 64
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctcccctaggctttatagaacatagtactgccaaaaacttgatttcagacttc 264
Query: 65 tcaccttcagaactgtaagacaataaatttctgttgttttaagacacccagtttgttata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcaccttcagaactgtaagacaataaatttctgttgttttaagacacccagtttgttata 324
Query: 125 ctttataactacagccttaagagatggacatactgttcttcctgctgtgtgctaggacat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctttataactacagccttaagagatggacatactgttcttcctgctgtgtgctaggacat 384
Query: 185 tggtttgagctttctctcatttctgttccgctcgggttaaaatgaagttctaacagtagc 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggtttgagctttctctcatttctgttccgctcgggttaaaatgaagttctaacagtagt 444
Query: 245 ttatgggctgggagagaatgaagagtggtattacctctgcccagttgctccagggccatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttatgggctgggagagaatgaagagtggtattacctctgcccagttgctccagggccatt 504
Query: 305 gctttgacttgttcctttctcagggagcatagcgcctaccaggttccagactttgaaaac 364
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 505 gctttgacttgttcctttctcagggagcatagctcctaccagtttccagactttgaaaac 564
Query: 365 caccttgtcccttttgtcccttggtcttgtgagtggtagttcctctcaattattttcatc 424
|||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 565 caccttgtccctcgtgtcccttggtcttgtgagtggtagttgctctcaattattttcatc 624
Query: 425 tttgtgtctgctgttgcacaccaaattattgtgaagccatgaagtaagacactcttctaa 484
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttgtatcagctgttgcacaccaaattattgtgaagccatgaagtaagacactcttctaa 684
Query: 485 aagaactcacattaaatctggaccccagagatctctcaaacactggaccaccaaacaggc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aagaactcacattaaatctggaccccagagatctctcaaacactggaccaccaaacaggc 744
Query: 545 agcatccaccagttgatatcaggccc 570
||||| ||||||||||||||||||||
Sbjct: 745 agcatacaccagttgatatcaggccc 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_n06.g1 MSMg01no155_n06.g1 CHROMAT_FILE:
MSMg01no155_n06.g1 PHD_FILE: MSMg01no155_n06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:49 2005
(484 letters)
>mm_chr14_86539111_86540000
Length = 890
Score = 837 bits (433), Expect = 0.0
Identities = 470/489 (96%), Gaps = 14/489 (2%)
Strand = Plus / Minus
Query: 1 ctgcctacattaaaaaaaaatacatacagggtatgaaaagtcagggatttggtctggcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ctgcctacattaaaaaaaaatacatacagggtatgaaaagtcagggatttggtctggcac 744
Query: 61 atgccggccctctgtttacatgctgaggattctcacgtgaatatgtttaagctccccccc 120
|||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 743 atgctggccctctgtttacatgctgatgattctcacgtgaatatgtttaagct-tccccc 685
Query: 121 cacccccccgagctccgaagctccttgctttctttacttggagaatcatgcattgggaac 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ca-------gagctccgaagctccttgctttctttacttggagaatcatgcattgggaac 632
Query: 181 tatctctagtgttctccgtccctgcttcaggaaaaaaacactcatcatttatttt--tt- 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 631 tatctctagtgttctccgtccctgcttcaggaaaaaaacactcatcatttattttagtta 572
Query: 238 ---ctccccattttagttacccctcttgcacacaaagacgtgagcaatgactgtgctagg 294
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 cccctccccattttagttacccctcttgcacacaaagacgtgagcaatgactgtgctagg 512
Query: 295 gcacacctgtcattcctttgccttactgtagcttccttggacttcgaaggagtaacgttg 354
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 511 gcacacctgtcactcctttgccttactgtagcttccttggacttccaaggagtaacgttg 452
Query: 355 gacagacaaaattattgtttgggttttttcctttttattgcttgagaatttacacattca 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gacagacaaaattattgtttgggttttttcctttttattgcttgagaatttacacattca 392
Query: 415 cataatgtgctttgaacagaattaaccctttattcactccccttcaattcctctcctatc 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cataatgtgctttgaacagaattaaccctttattcactccccttcaattcctctcctatc 332
Query: 475 tctttattg 483
|||||||||
Sbjct: 331 tctttattg 323
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 890
Length adjustment: 10
Effective length of query: 474
Effective length of database: 880
Effective search space: 417120
Effective search space used: 417120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
