Query= MSMg01no156_o21.b1 MSMg01no156_o21.b1 CHROMAT_FILE:
MSMg01no156_o21.b1 PHD_FILE: MSMg01no156_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:10 2005
(302 letters)
>mm_chr14_71276505_71277205
Length = 701
Score = 561 bits (290), Expect = e-164
Identities = 296/298 (99%), Gaps = 1/298 (0%)
Strand = Plus / Minus
Query: 1 atgagagaccacatctcaaaaagcaaattgggaagcaatcaacaatgtctttattcacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atgagagaccacatctcaaaaagcaaattgggaagcaatcaacaatgtctttattcacac 274
Query: 61 cctcagtagtcttcatagcacattccagagcaacaacacattactttgggagaaaaaaaa 120
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 273 cctcagtagtcttcatagcacattccggagcaacaacacattacttt-ggagaaaaaaaa 215
Query: 121 aaacctgtttgcaagggaccagggagatagctcagtcagtaacatgcttgtcttgcaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aaacctgtttgcaagggaccagggagatagctcagtcagtaacatgcttgtcttgcaagc 155
Query: 181 atgagacttgagttcaatccatagaactcacattaaaaacaagctgggtgtggtgggatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 atgagacttgagttcaatccatagaactcacattaaaaacaagctgggtgtggtgggatg 95
Query: 241 tacttgctatcccagggatgataggataaaggcaacaattttatccagctgtgaatcc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 tacttgctatcccagggatgataggataaaggcaacaattttatccagctgtgaatcc 37
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 701
Length adjustment: 9
Effective length of query: 293
Effective length of database: 692
Effective search space: 202756
Effective search space used: 202756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_o21.g1 MSMg01no156_o21.g1 CHROMAT_FILE:
MSMg01no156_o21.g1 PHD_FILE: MSMg01no156_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:11 2005
(287 letters)
>mm_chr14_71106954_71107640
Length = 687
Score = 549 bits (284), Expect = e-161
Identities = 284/284 (100%)
Strand = Plus / Plus
Query: 1 aaccaaggctttctctgcctgcagtcgagtggttgtatctgttgtttcatacaactgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaccaaggctttctctgcctgcagtcgagtggttgtatctgttgtttcatacaactgttt 260
Query: 61 gcacagattctctagttgggccaggctctggaaaagatcagtaagaaaaaggtcagtcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcacagattctctagttgggccaggctctggaaaagatcagtaagaaaaaggtcagtcta 320
Query: 121 ggcaactacctatctaatgtactctaacttgaaattcctagacaaagccaaccatgctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcaactacctatctaatgtactctaacttgaaattcctagacaaagccaaccatgctca 380
Query: 181 gtgaagcaagaactgccactcgccagaagctcagtagcctttatttaataatcacatgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgaagcaagaactgccactcgccagaagctcagtagcctttatttaataatcacatgca 440
Query: 241 tctctctttatttgaagcagaaaacaaaatgacagaatacttaa 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctctctttatttgaagcagaaaacaaaatgacagaatacttaa 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
