Query= MSMg01no157_k07.b1 MSMg01no157_k07.b1 CHROMAT_FILE:
MSMg01no157_k07.b1 PHD_FILE: MSMg01no157_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:01 2005
(317 letters)
>mm_chr14_23523062_23523778
Length = 717
Score = 538 bits (278), Expect = e-157
Identities = 305/314 (97%), Gaps = 1/314 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgctctgacttctttcaa-aatagatggacagtaacatgtaagctgaaataaa 62
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattctgctctgacttctttcaacaatagatggacagtaacatgtaagctgaaataaa 262
Query: 63 tcctttcttccctaggttgcttttgatcatggtatttatcacaacaatggaacaccaact 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcctttcttccctaggttgcttttgatcatggtatttatcacaacaatggaacaccaact 322
Query: 123 agtacaggtagagtggagttctctacactccactcaacaatctcccctgatggttagtct 182
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agtacaggtagagtggagtaatctacactccactcaacaatctcccctgatggttagtct 382
Query: 183 tcaagtatgggctgtttatcaggatgaattcattcccctaagctgtatagtatttctgct 242
||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 383 tcaagtatgggctgtgtatcaggatgaattcattcccctaagccctatagtatttctgct 442
Query: 243 tggtgtcttctttgcatcccttctgaatgtgtactattgacccaaatgagaagggtttaa 302
||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 443 tggtgtcttctttgcattccttctgaatgtgtactaacgacccaaatgagaagggtttaa 502
Query: 303 tgatagatgttatt 316
||||||||||||||
Sbjct: 503 tgatagatgttatt 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_k07.g1 MSMg01no157_k07.g1 CHROMAT_FILE:
MSMg01no157_k07.g1 PHD_FILE: MSMg01no157_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:01 2005
(292 letters)
>mm_chr14_23704762_23705453
Length = 692
Score = 530 bits (274), Expect = e-155
Identities = 286/290 (98%)
Strand = Plus / Minus
Query: 1 aatccccaagacccacatgttataaagagaacagactcacacaggcctccacatgcatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aatccccaagacccacatgttataaagagaacagactcacacaggcctccacatgcatgc 431
Query: 61 gatgacacaagtttgcccctctcacacttaaatggatgcacgtaatttaaaaaaaaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gatgacacaagtttgcccctctcacacttaaatggatgcacgtaatttaaaaaaaaaaaa 371
Query: 121 agaggagataataaatttcaaataaaatgattactggatacaatacaagaggtttgaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agaggagataataaatttcaaataaaatgattactggatacaatacaagaggtttgaaac 311
Query: 181 ctgtaattctaaaactgacaccaaggttagggatcagtgcaaatcacaagtaccaggcaa 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctgtaattctaagactgacaccaaggttagggatcagtgcaaatcacaagtaccaggcaa 251
Query: 241 ttaaggaaaatgtgtttgttgactgcctcaaagcaagccatgttcaggag 290
||||||| |||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 250 ttaaggagaatgtgtttgttgactgcatcagagcaagccatgttcaggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
