Query= MSMg01no158_c13.b1 MSMg01no158_c13.b1 CHROMAT_FILE:
MSMg01no158_c13.b1 PHD_FILE: MSMg01no158_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:38 2005
(668 letters)
>mm_chr14_83594606_83595673
Length = 1068
Score = 1158 bits (599), Expect = 0.0
Identities = 626/635 (98%)
Strand = Plus / Minus
Query: 4 ggaattctgggagacacatcagtaagcacttacactactaatctatcactccaaccttat 63
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 635 ggaattctgggagacagatcagtaagcacttatactactaatctatcactccaaccttat 576
Query: 64 tctgtaaattcttatccatcctactctttaccaaagattgtaactgagtaataacagtgt 123
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tctgtaaatacttattcatcctactctttaccaaagattgtaactgagtaataacagtgt 516
Query: 124 aattaaaacattaattttgttgatagtgaatgaaattaatacagtacacttaaggatatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aattaaaacattaattttgttgatagtgaatgaaattaatacagtacacttaaggatatg 456
Query: 184 ctgcctggaaatattttcagaacaaattaactagatgggaggaggagagtgcctgaatgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ctgcctggaaatattttcagaacaaattaactagatgggaggaggagagtgcctgaatgg 396
Query: 244 acataatgcagcatggttaatcaaattttattgtataaacttataatagtacactgaaga 303
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 395 acataatgcagcatggttaatcaaagtttattgtataaacttataatagtacactgaaga 336
Query: 304 gtttcttataagatgatggataaattaaagatagtttagctcactgcaaagcttcccggc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gtttcttataagatgatggataaattaaagatagtttagctcactgcaaagcttcccggc 276
Query: 364 agcatgcacagccattggttaaaaaaatattgtttacacaatgtcaagtttccacttcct 423
|||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 agcatggatagtcattggttaaaaaaatattgtttacacaatgtcaagtttccacttcct 216
Query: 424 ttatattcaaccacactaattaccaaagcaacttgcagaagaaagagtttatttgggttt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ttatattcaaccacactaattaccaaagcaacttgcagaagaaagagtttatttgggttt 156
Query: 484 acagtgagaggtaagcaagagtagaaaggtgaaacccaaggaaaacagagaaagtaaact 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 acagtgagaggtaagcaagagtagaaaggtgaaacccaaggaaaacagagaaagtaaact 96
Query: 544 gaaaatggcatgactatttaaactttcaaagctcacctcaagtaacatatgcctcccacc 603
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 95 gaaaatggcatgactatttaaactctcaaagctcacctcaagtaacatatgcctcccacc 36
Query: 604 aagatagcaagtcctaaacttgtcagaagagtgct 638
|||||||||||||||||||||||||||||||||||
Sbjct: 35 aagatagcaagtcctaaacttgtcagaagagtgct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no158_c13.g1 MSMg01no158_c13.g1 CHROMAT_FILE:
MSMg01no158_c13.g1 PHD_FILE: MSMg01no158_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:38 2005
(632 letters)
>mm_chr14_83535278_83536309
Length = 1032
Score = 1178 bits (609), Expect = 0.0
Identities = 627/633 (99%), Gaps = 1/633 (0%)
Strand = Plus / Plus
Query: 1 acaatgctaacatgatgaccacatgctgggattcattactgaatgttaagtgcttaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 acaatgctaacatgatgaccacatgctgggattcattactgaatgttaagtgcttaattt 259
Query: 61 gtgatgatgaaaaattttaaaaagcccggatgaaaacaaagaaaacaaataagaaaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtgatgatgaaaaattttaaaaagcccggatgaaaacaaagaaaacaaataagaaaatat 319
Query: 121 gagggtgttatacacataaagtagagcttaggtatactctatgttgaatttcattatcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gagggtgttatacacataaagtagagcttaggtatactctatgttgaatttcattatcaa 379
Query: 181 aatatattcctatcatatttgtttatatttgtttatagtagggaataagcccgggcctta 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aatatattcctctcatatttgtttatatttgtttatagtagggaataagcccgggcctta 439
Query: 241 ttcttgctaggcaagcacaaaatatacattttacatttcattattttttattttgcacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 440 ttcttgctaggcaagcacaaaatatacattttacatttcattattttttattttgtaaaa 499
Query: 301 agcacaaagttgcccaagctgtccttgaacacattttttttt-cacttcagaaatgcctt 359
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 500 agcacaaagttgcccaagctgtccttgaacacattttttttttcacttcagaaatgcctt 559
Query: 360 tcacatcaatactcctgttataatctcctgagaattaaaggcttaaatcaccaaaaccca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcacatcaatactcctgttataatctcctgagaattaaaggcttaaatcaccaaaaccca 619
Query: 420 ttcacaataaatgtcagtgtgtatctgtgtgtgcctgtgtgtgtttgtgtgagtgtgttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttcacaataaatgtcagtgtgtatctgtgtgtgcctgtgtgtgtttgtgtgagtgtgttt 679
Query: 480 gtgtgtgtgtgtgtgtgcatgcatctacattagttaacaatttttggaattctgatattc 539
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 680 gtgtgtgtgtgtgtgtgcatgcatctacattagttaacattttttggaattctgatattc 739
Query: 540 attcacaagtgggagaagaacagcatcaatgtttggtgacttcttcattgctgtgcacat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 attcacaagtgggagaagaacagcatcaatgtttggtgacttcttcattgctgtgcacat 799
Query: 600 tgatttttgaggcatggtcactcatgaagttca 632
||||||||||||||||||||||| |||||||||
Sbjct: 800 tgatttttgaggcatggtcactcttgaagttca 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
