Query= MSMg01no158_i19.b1 MSMg01no158_i19.b1 CHROMAT_FILE:
MSMg01no158_i19.b1 PHD_FILE: MSMg01no158_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:05 2005
(229 letters)
>mm_chr14_77672115_77672744
Length = 630
Score = 429 bits (222), Expect = e-125
Identities = 228/230 (99%), Gaps = 1/230 (0%)
Strand = Plus / Minus
Query: 1 gtctgagctccctgcgagaagccctccgctgctcttctcctccgtttttaattttccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gtctgagctccctgcgagaagccctccgctgctcttctcctccgtttttaattttccagc 371
Query: 61 tcagcatcacttagttcataga-ttttaaatgaaacaaagagggtgtatgggagagagac 119
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 370 tcagcatcacttagttcatagatttttaaatgaaacaaagagggtgcatgggagagagac 311
Query: 120 gaacccacaaaaagtacctgctttggttcccatttttaacgtatttatgagcaaaatttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gaacccacaaaaagtacctgctttggttcccatttttaacgtatttatgagcaaaatttt 251
Query: 180 tcataagaagctttgattaaaaacttgacgcaaaatatgatgtgtgcctg 229
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tcataagaagctttgattaaaaacttgacgcaaaatatgatgtgtgcctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 630
Length adjustment: 9
Effective length of query: 220
Effective length of database: 621
Effective search space: 136620
Effective search space used: 136620
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no158_i19.g1 MSMg01no158_i19.g1 CHROMAT_FILE:
MSMg01no158_i19.g1 PHD_FILE: MSMg01no158_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:05 2005
(292 letters)
>mm_chr14_77555500_77556191
Length = 692
Score = 522 bits (270), Expect = e-153
Identities = 285/290 (98%)
Strand = Plus / Plus
Query: 1 ttgggtgaataaagtctgcttatttaaagtaagtatggaaaactataccaacagctcgat 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 ttgggtgaataaagtctgcttatttaaagtaagcatggaaaactataccaacagctcgat 260
Query: 61 gtacctttcaggaataggacagataagtgggatttagccataatctctaaggtgttagag 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 gtacctttcaggaataggacagataagtgggatttagtcataatctctaaggtgttagag 320
Query: 121 cgctcggtgatgaaggtgttctcagcttgctttgagttacttgtgtatctggacagttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 cgctcggtgatgaaggtgttctcagcttgctttgagttacttgtgtatcgggacagttgg 380
Query: 181 cagaatcctaacaaagagaaggccaatacttctatatggaggtggctaactttgagggaa 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagaatcctaacaaagagagggccaatacttctatatggaggtggctaactttgagggaa 440
Query: 241 agtggcttccatggagaacaaaaaggtaacattttcatctggagcgatcc 290
||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtggcttccaaggagaacaaaaaggtaacattttcatctggagcgatcc 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
