Query= MSMg01no160_a16.b1 MSMg01no160_a16.b1 CHROMAT_FILE:
MSMg01no160_a16.b1 PHD_FILE: MSMg01no160_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:53 2005
(149 letters)
>mm_chr14_83189412_83189960
Length = 549
Score = 275 bits (142), Expect = 1e-78
Identities = 142/142 (100%)
Strand = Plus / Plus
Query: 2 aaatgtggagctgaatggtgtttgtatttatgggtttgaactatgtgatttagtataata 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aaatgtggagctgaatggtgtttgtatttatgggtttgaactatgtgatttagtataata 261
Query: 62 ttttctaggtgaatagttgcatctattttcctggaaattgtaatatatatatatatatat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttttctaggtgaatagttgcatctattttcctggaaattgtaatatatatatatatatat 321
Query: 122 atatatatatatatatatatat 143
||||||||||||||||||||||
Sbjct: 322 atatatatatatatatatatat 343
Score = 78.1 bits (40), Expect = 2e-19
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 106 atatatatatatatatatatatatatatatatatatatat 145
||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atatatatatatatatatatatatatatatatatatatat 304
Score = 78.1 bits (40), Expect = 2e-19
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 104 atatatatatatatatatatatatatatatatatatatat 143
||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atatatatatatatatatatatatatatatatatatatat 304
Score = 66.5 bits (34), Expect = 7e-16
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 104 atatatatatatatatatatatatatatatatatatatatat 145
||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 353 atatacatacatatatatatatatatatatatatatatatat 312
Score = 66.5 bits (34), Expect = 7e-16
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 104 atatatatatatatatatatatatatatatatatatatatat 145
||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 355 atatatacatacatatatatatatatatatatatatatatat 314
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 8
Length of query: 149
Length of database: 549
Length adjustment: 8
Effective length of query: 141
Effective length of database: 541
Effective search space: 76281
Effective search space used: 76281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no160_a16.g1 MSMg01no160_a16.g1 CHROMAT_FILE:
MSMg01no160_a16.g1 PHD_FILE: MSMg01no160_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:53 2005
(298 letters)
>mm_chr14_83347156_83347853
Length = 698
Score = 534 bits (276), Expect = e-156
Identities = 282/284 (99%)
Strand = Plus / Minus
Query: 1 caggagagccagggctacacagagaaaccctgtctcaaaaaacaaacaaacaaataaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 caggagagccagggctacacagagaaaccctgtctcaaaaaacaaacaaacaaataaaaa 471
Query: 61 tcaggatctattactaatgaccttgtatttaattgtatctttcccataaatccctagcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tcaggatctattactaatgaccttgtatttaattgtatctttcccataaatccctagcct 411
Query: 121 accatttccagataagtcattcgaactattttataagtaaaagtttttctttttaacatg 180
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 410 gccatttccagataagtcattcgaactattttataagtaaaagttttcctttttaacatg 351
Query: 181 ttaaaattatagtttattcatttaagcttcattgtagtaataattgtatgtggtagagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ttaaaattatagtttattcatttaagcttcattgtagtaataattgtatgtggtagagaa 291
Query: 241 ggcagagagaatgtagatccctgagtagtggaaaagttcaagga 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ggcagagagaatgtagatccctgagtagtggaaaagttcaagga 247
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
