Query= MSMg01no161_a14.b1 MSMg01no161_a14.b1 CHROMAT_FILE:
MSMg01no161_a14.b1 PHD_FILE: MSMg01no161_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:11 2005
(456 letters)
>mm_chr14_105476396_105477251
Length = 856
Score = 752 bits (389), Expect = 0.0
Identities = 428/444 (96%), Gaps = 6/444 (1%)
Strand = Plus / Minus
Query: 16 gaattcagtggaataggaacacgattttcctgtgaggaagatggttttggtggttgttcc 75
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gaattcagtggaataggaacatgattttcctgtgaggaagatggttttggtggttgttcc 597
Query: 76 cctgcctaaggcaaatcatatcaggcagcctcacatatggagtgggatttaggaattagg 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 cctgcctaaggcaaatcatatcaggcagcctcacatatggagtgggatttaggaattagg 537
Query: 136 taaaattgtattcttcccctaggcgtgggattccatttcttaaatctggtgcatggggag 195
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 536 taaaattgtattcttcccctaggcgtgggatttcatttcttaaatctggtgcatggggag 477
Query: 196 aagccattatagatctttttgtagcatcttctcgtagattattggtcctctcctatggaa 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aagccattatagatctttttgtagcatcttctcgtagattattggtcctctcctatggaa 417
Query: 256 catttctaagtgctctgttggctgtgtaagacaaggacagcatcttgagaactcataact 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 catttctaagtgctctgttggctgtgtaagacaaggacagcatcttgagaactcataact 357
Query: 316 gtcgagactcagtgacctggagagtgtttattatggtcatttgtttgtaggagattttcc 375
||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 356 gtcaagactcagtgacctggagagtgtttattatggtcatttgtttgtaggagacatccc 297
Query: 376 catgctcccatgagagctggatccctcttttatggaagatgagtg---tttttctccccc 432
||||||||||||||||||||||||||||||||||||||||||||| | | | ||||
Sbjct: 296 catgctcccatgagagctggatccctcttttatggaagatgagtgagctgt---tgcccc 240
Query: 433 cccccctctgacagncatccctaa 456
| |||||||||||| |||||||||
Sbjct: 239 cacccctctgacagccatccctaa 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_a14.g1 MSMg01no161_a14.g1 CHROMAT_FILE:
MSMg01no161_a14.g1 PHD_FILE: MSMg01no161_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:11 2005
(333 letters)
>mm_chr14_105333146_105333878
Length = 733
Score = 621 bits (321), Expect = 0.0
Identities = 330/333 (99%)
Strand = Plus / Plus
Query: 1 ctaccagtacagactctataaaaatcccattatatttatatgctcataccctgagtacct 60
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 ctaccagtagagactctataaaaatcccattatatttatatgctcataccctgagtactt 260
Query: 61 gaactaataaaattgcattaatggctatttacataaattcacaattctaaattagacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaactaataaaattgcattaatggctatttacataaattcacaattctaaattagacctt 320
Query: 121 taatttctgtaataaaaaagaaagcggctcatgtaatttccccatttttattttcctaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatttctgtaataaaaaagaaagcggctcatgtaatttccccatttttattttcctaca 380
Query: 181 tggaatagggtcgctctaacataatgtacgactttgtgaatatttgcaaagctgctaata 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 tggaatagggtcgctctaacataatgtacgactttgtgaatatttgcagagctgctaata 440
Query: 241 ttttatctaatattatattttgtgttttttgatctctgacccctgtttatactcccagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttatctaatattatattttgtgttttttgatctctgacccctgtttatactcccagaa 500
Query: 301 ccctcatgagcaatgctcactatgataaccttt 333
|||||||||||||||||||||||||||||||||
Sbjct: 501 ccctcatgagcaatgctcactatgataaccttt 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
