Query= MSMg01no162_n02.b1 MSMg01no162_n02.b1 CHROMAT_FILE:
MSMg01no162_n02.b1 PHD_FILE: MSMg01no162_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:16 2005
(204 letters)
>mm_chr14_96419471_96420074
Length = 604
Score = 331 bits (171), Expect = 2e-95
Identities = 186/195 (95%), Gaps = 8/195 (4%)
Strand = Plus / Minus
Query: 1 ttatatttctacttcttttgtgtgtacaagtatgttttatgagtgtgtgtgtatccatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ttatatttctacttcttttgtgtgtacaagtatgttttatgagtgtgtgtgtatccatgt 332
Query: 61 gtgttgcatgaatgtttgtttattacatgcatgtgggtccacagatgcacttatctgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gtgttgcatgaatgtttgtttattacatgcatgtgggtccacagatgcacttatctgtgt 272
Query: 121 gtac----ttttgtatttaaaggtcagaggactgtgtcaatggcttctatttctttcata 176
|||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gtacaaag----gcatttaaaggtcagaggactgtgtcaatggcttctatttctttcata 216
Query: 177 gatattttttaatga 191
|||||||||||||||
Sbjct: 215 gatattttttaatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no162_n02.g1 MSMg01no162_n02.g1 CHROMAT_FILE:
MSMg01no162_n02.g1 PHD_FILE: MSMg01no162_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:16 2005
(290 letters)
>mm_chr14_96263107_96263796
Length = 690
Score = 559 bits (289), Expect = e-164
Identities = 289/289 (100%)
Strand = Plus / Plus
Query: 1 caatgcttatatattaattacttagttgttgccttaggtgtctatggagtcattaggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatgcttatatattaattacttagttgttgccttaggtgtctatggagtcattaggaga 260
Query: 61 tggtaactaggagaggaaagttaagtctttgtggaacatgtcaattcaaaggaatctcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtaactaggagaggaaagttaagtctttgtggaacatgtcaattcaaaggaatctcaa 320
Query: 121 cttgcaataaaaggttattttggggggtaaaatttacttttatcaagtagggaaagtcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgcaataaaaggttattttggggggtaaaatttacttttatcaagtagggaaagtcat 380
Query: 181 acaaaagtcaaataaaaatctacaaattataatgatctggatgatgtttcatttctccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaaaagtcaaataaaaatctacaaattataatgatctggatgatgtttcatttctccta 440
Query: 241 acagaatgtcattatatcccaagagactggtagctttttggaaaaaaac 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagaatgtcattatatcccaagagactggtagctttttggaaaaaaac 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
