Query= MSMg01no164_e07.b1 MSMg01no164_e07.b1 CHROMAT_FILE:
MSMg01no164_e07.b1 PHD_FILE: MSMg01no164_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:04 2005
(596 letters)
>mm_chr14_71822863_71823856
Length = 994
Score = 1104 bits (571), Expect = 0.0
Identities = 587/593 (98%), Gaps = 2/593 (0%)
Strand = Plus / Plus
Query: 4 ggaattcagtataattcaaacctgctatagcactgaaaggcccttccttcccatcaatgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagtataattcaaacctgctatagcactgaaaggcccttccttcccatcaatgt 263
Query: 64 gtattgaacctgaacatgggcacaggttgtattaccaaacaagggaaagcaagtagatag 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtattgaacctgaatatgggcacaggttgtattaccaaacaagggaaagcaagtagatag 323
Query: 124 ggtgagcacccttcatcctccactgctgctgcttggagtattgctgataagccacatctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggtgagcacccttcatcctccactgctgctgcttggagtattgctgataagccacatctt 383
Query: 184 ggcttatctcttttttttccctcacactctggtttgtaaaccttcccttgttattccccc 243
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggcttatctc--ttttttccctcacactctggtttgtaaaccttcccttgttattccccc 441
Query: 244 aaggactttttttttgcctggcctctaggtcattctgcaagccctgatttcctgcctccc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaggactttttttttgcctggcctctaggtcattctgcaagccctgatttcctgcctccc 501
Query: 304 ctggcttcagctttagcctatctagtgtctttgcttgtctttgcttcttcatctctccta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 502 ctggcttcagctttagcctatctagtgtctttgcttgtctttgcttcttcatccctccta 561
Query: 364 tttctcagacaactcaggcatttctatatcaccggtgttggctttcttttggaggatgag 423
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 562 tttctcagacaactcaggcatttctatatcaccagtgttggctttcttttggaggatgag 621
Query: 424 gtggtttctaagagattctcttacttcataggccagtagaaagctttcccaattccctag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gtggtttctaagagattctcttacttcataggccagtagaaagctttcccaattccctag 681
Query: 484 gatgttttataacaaggaagtctcaattggtttattattcctcttgtagtaggggcctct 543
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gatgttttataacaaggaagcctcaattggtttattattcctcttgtagtaggggcctct 741
Query: 544 tgatcaagcatctttataatccagtactagttctaaatgcctagccctaactc 596
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tgatcaagcatctttataatccagtactagttctaaatgcctagccctaactc 794
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 994
Length adjustment: 10
Effective length of query: 586
Effective length of database: 984
Effective search space: 576624
Effective search space used: 576624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_e07.g1 MSMg01no164_e07.g1 CHROMAT_FILE:
MSMg01no164_e07.g1 PHD_FILE: MSMg01no164_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:04 2005
(264 letters)
>mm_chr14_71973680_71974343
Length = 664
Score = 456 bits (236), Expect = e-133
Identities = 256/264 (96%), Gaps = 3/264 (1%)
Strand = Plus / Minus
Query: 1 tacagattcatgtgttttctttgtttggtttaaacacctctctaacccaaaacactacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tacagattcatgtgttttctttgtttggtttaaacacctctctaacccaaaacactacaa 247
Query: 61 attatttgatggttagatgcttcagttcttcccattttctggtttataaaaagaacccag 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 attatttaatggttagatgcttcagttcttcccattttctggtttataaaaagaacccag 187
Query: 121 atgcccctcaacagaggaatggatacaaaaaaatgtggtacatttacacaatggagtact 180
|||||||||| ||||| ||||||||||||||||||| |||||||| |||||||||| |
Sbjct: 186 atgcccctcagcagagaaatggatacaaaaaaatgt---acatttacccaatggagtagt 130
Query: 181 actcagctattaaaaagaatgaatttatgaaatttctaggcaaatggatggacctggagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 actcagctattaaaaagaatgaatttatgaaatttctaggcaaatggatggacctggagg 70
Query: 241 gcatcatcctgagtgaggtaaccc 264
||||||||||||||||||||||||
Sbjct: 69 gcatcatcctgagtgaggtaaccc 46
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 664
Length adjustment: 9
Effective length of query: 255
Effective length of database: 655
Effective search space: 167025
Effective search space used: 167025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
