Query= MSMg01no164_g23.b1 MSMg01no164_g23.b1 CHROMAT_FILE:
MSMg01no164_g23.b1 PHD_FILE: MSMg01no164_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:17 2005
(650 letters)
>mm_chr14_50003454_50004503
Length = 1050
Score = 1218 bits (630), Expect = 0.0
Identities = 642/646 (99%), Gaps = 1/646 (0%)
Strand = Plus / Minus
Query: 5 gaattcttttgtgtattctgttacctcactcaggatgatgccctccaggtccaaccattt 64
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 gaattcttttgtg-attgtgttacctcactcaggatgatgccctccaggtccaaccattt 882
Query: 65 gcctaggaatttcataaattcattctttttatttgtaagatttctattggccagaataca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 gcctaggaatttcataaattcattctttttatttgtaagatttctattggccagaataca 822
Query: 125 gcagtgagaagggtcacctggttgtttagaagaaaaacatttctgaagacaagtttctaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gcagtgagaagggtcacctggttgtttagaagaaaaacatttctgaagacaagtttctaa 762
Query: 185 caagcaaatgattgttttttagcatggataaatttaaacgttggtgtatagtgttggtgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 caagcaaatgattgttttttagcatggataaatttaaacgttggtgtatagtgttggtgt 702
Query: 245 caagtctattcctgcacacaaaatgtaatttgtaatgataaccctgcgttataaagattg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 caagtctattcctgcacacaaaatgtaatttgtaatgataaccctgcgttataaagattg 642
Query: 305 aagaactagagactgactgtgaatttattgccaaactttgttcaggatgataaagaactg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aagaactagagactgactgtgaatttattgccaaactttgttcaggatgataaagaactg 582
Query: 365 ccttgcttaccaaatatttgcatcccaaataaaaagaggaaaaacttaaaaacattagca 424
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ccttgcttaggaaatatttgcatcccaaataaaaagaggaaaaacttaaaaacattagca 522
Query: 425 ttgaacaggatgcttttcacttgcaggaaattacatgtcatgggaaaaaattaaaaacca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ttgaacaggatgcttttcacttgcaggaaattacatgtcatgggaaaaaattaaaaacca 462
Query: 485 ctataattgtctatttctagccaaaagacattctctgctgtaaatcattaaatcccctcc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ctataattgtctatttctagccaaaagacattctctgctgtaaatcattaaatcccctcc 402
Query: 545 agtcagcaaaataaatttggaggtctgatgtctggtggccaggtccagtgatgaccctgc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 agtcagcaaaataaatttggaggtctgatgtctggtggccaggtccagtgatgaccctgc 342
Query: 605 tcttcctgtgaggctatacctgactgctcttcctttcccacgtgac 650
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tcttcctgtgaggctatacctgactgctcttcctttcccacgtgac 296
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_g23.g1 MSMg01no164_g23.g1 CHROMAT_FILE:
MSMg01no164_g23.g1 PHD_FILE: MSMg01no164_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:17 2005
(292 letters)
>mm_chr14_49902561_49903252
Length = 692
Score = 565 bits (292), Expect = e-165
Identities = 292/292 (100%)
Strand = Plus / Plus
Query: 1 tttgtttagctctgtaccccatttttaatagggttttttttttttaatttctggagtcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtttagctctgtaccccatttttaatagggttttttttttttaatttctggagtcct 260
Query: 61 attaagatgttttcaaatacagtttctttactgaaagctcttgactgggaagtgctcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attaagatgttttcaaatacagtttctttactgaaagctcttgactgggaagtgctcctt 320
Query: 121 tcctcagtggatgcatgacctgtgaatttggatattattccagcaggggtttgccgttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctcagtggatgcatgacctgtgaatttggatattattccagcaggggtttgccgttca 380
Query: 181 tatcctttatgtatgagtcctgggtaggtgatttatgcttggatcacgtcagaggcatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatcctttatgtatgagtcctgggtaggtgatttatgcttggatcacgtcagaggcatct 440
Query: 241 tatcttctgctgtccctttttagtctgtctctttctctcaacatgttttctc 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatcttctgctgtccctttttagtctgtctctttctctcaacatgttttctc 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
