AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCAGAAGAGAGTTTCTTTGAATAAAAGGTATCTTAAAAAAAAAAAAGCA
GACCCACACATGGTCTAAAAACTTTCCACACTTTCCCTAAGGCCTCGTGA
AGGACTAAACATGAATGAGTGAGCTTGCCAAGCTACCTCAGAAAGTTTTT
GCTTCCTTCCCCACATGACCAGTTTGTAGAACTCCAATGGTGACCTGCAA
TCCACAAGACTGTTCAGGCATACTCTAGTGGGGCTGAGCCATGACCATGA
ATTAGAACAAGAAGTGTGACCAATACACACAACACATTATGCTGGGTTAC
AGGGAAAGGACAGGGGCAAACTGTTCCAAACATATGATTGGGCTTTCCCT
GTCTGATAAGTGAACCACAACAAAACAGCAATGATTTCAGGCTTATAGAA
AACAGCTGGCCTCCACTTAGGGCCTCCACATTCCAGCATGGCTGCTAGCA
TTTACTATAGCATGCTGCAGCCTTGGAACACCTAGGAATCATAGCAAGGG
CTCATGGCCAGAGGTTACTTACTTTAGCAACTTCACAACATTCTATTCAT
TCACTTCACCAATATTTATTCTGCCGAATTTGCCCAACAGTATTTAGATG
CTGAGGGCATGAATTCTTATTTTCGTTTCTGTCTGAGAGACAAGTATGGC
TATAAGGAGTTCTTGGGTGGTAAN

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAGTTTGTGAGAATTTTATTGAGTATTTTT
GCAATGATATTCATGAGGGAAATTGCCCTGAAGTTCTCTTTCTTTATTGA
GTCTTTGGGTGGTTTATGTATCAGAGTAATTGTCGCTTCAAAGAATCAAT
TGGGTAGAGTACCTTCTGTTTCTATTTTGTGGAATAGTTTGGGAAGTACT
AGTATTAGGTCTTCTTTGGAGGTCTGATAGAACTCTGCACTAAATTCACC
TACTCCTGGGCTTTTTTGTTTGTTAGACTATTAATGGCTGCTTCTATTTC
TTTAGGGGAGATAGGACTATTTAGATCATTAATCTGATCTATATTTAACT
TTGGTACCTTGCCCGCCCCTAGAAAATTGTCCATTTCATCCAGGTTACCT
AGTTTTGTTGAGTATAGCCTTTTGTAGTATGATCTGATGATGTTTTGGAT
TTCCTCAGGTTCTCTTGTTATGTCTCCCTTTTCATTTCTGATTTTGCTCA
TTAATATACTGTGCCCTCTAGTTAGACTGGCTAAGGGTTTATCTATCTTG
TTGATTTTCTTAAACTACCAACTCCTGTTATTGTTGACTCATTGTACAAT
TTCTTTTTGTTTTTTGGTTGCCTTCTGACAACTCGTCCTCTCTCTTATTT
TAACTTCCCTTCTTTCCAT

Query= MSMg01no165_d07.b1 MSMg01no165_d07.b1 CHROMAT_FILE:
MSMg01no165_d07.b1 PHD_FILE: MSMg01no165_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:16 2005
         (671 letters)



>mm_chr14_15447046_15448118
          Length = 1073

 Score = 1234 bits (638), Expect = 0.0
 Identities = 662/670 (98%), Gaps = 2/670 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccagaagagagtttctttgaataaaaggtatctt-aaaaaaaaaaaagcagacc 62
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 873 ggaattccagaagagagtttctttgaataaaaggtatcttaaaaaaaaaaaaagcagacc 814

                                                                       
Query: 63  caca-catggtctaaaaactttccacactttccctaaggcctcgtgaaggactaaacatg 121
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 cacaccatggtctaaaaactttccacactttccctaaggcctcgtgaaggactaaacatg 754

                                                                       
Query: 122 aatgagtgagcttgccaagctacctcagaaagtttttgcttccttccccacatgaccagt 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 aatgagtgagcttgccaagctacctcagaaagtttttgcttccttccccacatgaccagt 694

                                                                       
Query: 182 ttgtagaactccaatggtgacctgcaatccacaagactgttcaggcatactctagtgggg 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 ttgtagaactccaatggtgacctgcaatccacaagactgttcaggcatactctagtgggg 634

                                                                       
Query: 242 ctgagccatgaccatgaattagaacaagaagtgtgaccaatacacacaacacattatgct 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ctgagccatgaccatgaattagaacaagaagtgtgaccaatacacacaacacattatgct 574

                                                                       
Query: 302 gggttacagggaaaggacaggggcaaactgttccaaacatatgattgggctttccctgtc 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gggttacagggaaaggacaggggcaaactgttccaaacatatgattgggctttccctgtc 514

                                                                       
Query: 362 tgataagtgaaccacaacaaaacagcaatgatttcaggcttatagaaaacagctggcctc 421
           |||||||||||  | || |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 513 tgataagtgaaggataagaaaacagcaatgatttcaggcttatagaaagcagctggcctc 454

                                                                       
Query: 422 cacttagggcctccacattccagcatggctgctagcatttactatagcatgctgcagcct 481
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 453 cacttagggcctccacattccagcatggctgctagcatttactgtagcatgctgcagcct 394

                                                                       
Query: 482 tggaacacctaggaatcatagcaagggctcatggccagaggttacttactttagcaactt 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tggaacacctaggaatcatagcaagggctcatggccagaggttacttactttagcaactt 334

                                                                       
Query: 542 cacaacattctattcattcacttcaccaatatttattctgccgaatttgcccaacagtat 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cacaacattctattcattcacttcaccaatatttattctgccgaatttgcccaacagtat 274

                                                                       
Query: 602 ttagatgctgagggcatgaattcttattttcgtttctgtctgagagacaagtatggctat 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ttagatgctgagggcatgaattcttattttcgtttctgtctgagagacaagtatggctat 214

                     
Query: 662 aaggagttct 671
           ||||||||||
Sbjct: 213 aaggagttct 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1073
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1063
Effective search space:   702643
Effective search space used:   702643
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)