GTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCTGAGATAGCCCAGGCTAATCTTAAACTCAGCTTCCTCCAGGTT
CAGCCTCTCAGGTATTAGGTTACATGCATGCTCCACCATACCCAGTCAAT
TCTAATTTTGAAACATGGCATAATAAACATAAGAGTTACGCAGATTGCTA
GATTTGAGCATGTTTCCACATTTCTCTGTGTTCACCTCCCCACTTCTGTG
ACCCGGCCATGACTCATGCATTCCTTCCCATCTTACAGTAAGGAATATAA
AGCTGGTACAAGGGCCTTATTGCCCTCACCTATGTACAGCCACAGGAAGG
TGTGGTTTTTCATTTTACCCCNTCGCCCCTTGAACATGATGGCTTTATAG
TTGGACATGTATACAGACCTGATCTAAAAAGACAGAGTTTCCCATGCAAC
GTAAGCATCATTGTTATGGTTTATGAATACATACAATATACCTGGGTAGC
CTGCCTGGTCCTTGGGAAAATTCTTTTCCCTCGACTTCAAATATTGCCTT
AGTGACTATGGAAGATGCACTGAGCACTCTCCACTTAGGCCTTACTAAAA
ATATTTTTGTTTTATTCTATATAGAAATGCTCCCATTTAAAATGTTCTGT
TCTCCTAGCCTTTCTTGTAGCTAGGTGCAGCCATATATGTACTATGAACT
ATAGTGTGCGGTGATAATCATTGTTT

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACACCAGCTTGGTTTGTTGGTAAG
TACATTGCAATGACCAACTAAAAGGATGTTTGCTTAATAGGTAAACCACC
TTCAGATACAGCCCCTAAAGCTAAGAGAGCCCCTAAACAGAAGAAGATAG
TAGAGACTATAAACTCTGACTCAGACTCTGAATTTGGCATTCCAAAGAAG
ACTACAACACCAAAAGGTGAGGACTGGCTTTGTATAACTCTTAAATACAA
GATATAAAGAAAATATTTCTTTCTTCAATTTTATTGAGTTTAGTGACAGG
GTACCTATTTTTTTTTATCCCCGGNTCCATCCCCATTGTACCATACTGCA
TTCTAATGAATGACATAGAGCAGAATAAAACAATTAGTTGTGAGTTAAAA
CATTGACCAGATTAAATAAATATACTGAAAATAAGAAATGAAAATAAGAA
AAAAAAATAACACAGTGAGCTTCCTTGGGTCTGTCCAACCTCTGTCTCTC
ACTTCCTGTGTGTGGTTTATTGAGGAAAGCTTAAAAAAAAAAGCAAGCAA
ATAATCAAAAAACAAAAACCTATCAGAGAACTTATGGAGGTCAATATATA
GGCAGGCATGGTGTGAAGCCTTGTAAGTGAATCTGATTTTGACAGGTATT
CTTACTCCTTCTTGTTAAAAGTGTGGG

Query= MSMg01no168_l12.b1 MSMg01no168_l12.b1 CHROMAT_FILE:
MSMg01no168_l12.b1 PHD_FILE: MSMg01no168_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:09 2005
         (309 letters)



>mm_chr14_17426874_17427582
          Length = 709

 Score =  520 bits (269), Expect = e-152
 Identities = 296/305 (97%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctgagatagcccaggctaatcttaaactcagcttcctccaggttcagcctctca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gaattcctgagatagcccaggctaatcttaaactcagcttcctccaggttcagcctctca 545

                                                                       
Query: 65  ggtattaggttacatgcatgctccaccatacccagtcaattctaattttgaaacatggca 124
           ||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||
Sbjct: 544 ggtattaggttacatgcatgctccaacatacctagtcaattctaattttaaaacatggca 485

                                                                       
Query: 125 taataaacataagagttacgcagattgctagatttgagcatgtttccacatttctctgtg 184
           ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 taataaatataagagttatgcagattgctagatttgagcatgtttccacatttctctgtg 425

                                                                       
Query: 185 ttcacctccccacttctgtgacccggccatgactcatgcattccttcccatcttacagta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ttcacctccccacttctgtgacccggccatgactcatgcattccttcccatcttacagta 365

                                                                       
Query: 245 aggaatataaagctggtacaagggccttattgccctcacctatgtacagccacaggaagg 304
           ||||||||||||||||||||||||||  | |||||||||||||||||||||||||||| |
Sbjct: 364 aggaatataaagctggtacaagggccagactgccctcacctatgtacagccacaggaaag 305

                
Query: 305 tgtgg 309
           |||||
Sbjct: 304 tgtgg 300


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space:   210000
Effective search space used:   210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no168_l12.g1 MSMg01no168_l12.g1 CHROMAT_FILE:
MSMg01no168_l12.g1 PHD_FILE: MSMg01no168_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:09 2005
         (280 letters)



>mm_chr14_17260724_17261403
          Length = 680

 Score =  534 bits (276), Expect = e-156
 Identities = 279/280 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acaccagcttggtttgttggtaagtacattgcaatgaccaactaaaaggatgtttgctta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaccagcttggtttgttggtaagtacattgcaatgaccaactaaaaggatgtttgctta 260

                                                                       
Query: 61  ataggtaaaccaccttcagatacagcccctaaagctaagagagcccctaaacagaagaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataggtaaaccaccttcagatacagcccctaaagctaagagagcccctaaacagaagaag 320

                                                                       
Query: 121 atagtagagactataaactctgactcagactctgaatttggcattccaaagaagactaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagtagagactataaactctgactcagactctgaatttggcattccaaagaagactaca 380

                                                                       
Query: 181 acaccaaaaggtgaggactggctttgtataactcttaaatacaagatataaagaaaatat 240
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 acaccaaaaggtgaggactggctttgtataactcttaaatataagatataaagaaaatat 440

                                                   
Query: 241 ttctttcttcaattttattgagtttagtgacagggtacct 280
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctttcttcaattttattgagtttagtgacagggtacct 480


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space:   181841
Effective search space used:   181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)