Query= MSMg01no173_m05.b1 MSMg01no173_m05.b1 CHROMAT_FILE:
MSMg01no173_m05.b1 PHD_FILE: MSMg01no173_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:30 2005
(517 letters)
>mm_chr14_80721050_80721966
Length = 917
Score = 636 bits (329), Expect = 0.0
Identities = 345/353 (97%), Gaps = 6/353 (1%)
Strand = Plus / Minus
Query: 4 ggaattcttctcttc---atggaagaattctagaaaaccaagctaactaagtaaattttg 60
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ggaattctt---ttcaaaatggaagaattctagaaaaccaagctaactaagtaaattttg 294
Query: 61 ttgactttgtatttgacattattattgagacttaaatcaaaatccttgaatatagttttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ttgactttgtatttgacattattattgagacttaaatcaaaatccttgaatatagttttg 234
Query: 121 aatattaaattgaaaatcccatatacaaccaccaaacccagacactattgcatatgccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 aatattaaattgaaaatcccatatacaaccaccaaacccagacactattgcatatgccag 174
Query: 181 aaagattttgctgacaggaccctgatatatctctcttttgtgaggctatgccagtgcctg 240
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 173 aaagattttgctgacaggacgctgatatagctctcttttgtgaggctatgccagtgcctg 114
Query: 241 gcaaatacagaagtggatcctcacagtcatctattgaatggaacacagggcccataatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 gcaaatacagaagtggatcctcacagtcatctattgaatggaacacagggcccataatga 54
Query: 301 aggagctagagaaagtacccaagaagctaaagggttctgcaaccctataggag 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 aggagctagagaaagtacccaagaagctaaagggttctgcaaccctataggag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_m05.g1 MSMg01no173_m05.g1 CHROMAT_FILE:
MSMg01no173_m05.g1 PHD_FILE: MSMg01no173_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:30 2005
(642 letters)
>mm_chr14_80570121_80571162
Length = 1042
Score = 1168 bits (604), Expect = 0.0
Identities = 635/650 (97%), Gaps = 9/650 (1%)
Strand = Plus / Plus
Query: 1 tgtatttaatttcagaggggtgggtatgaaagagcagagtgtttgctcgcggcagggatt 60
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 194 tgtatttaatttcagaggggtgggtatgaaagagcagagtgtttgcttg-ggcagggatt 252
Query: 61 tgaaaccttttatagactttttgagttcttcagatgaaggagatccacatggctgttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tgaaaccttttatagactttttgagttcttcagatgaaggagatccacatggctgttctt 312
Query: 121 agtagagaaagtgggtctgcaagccctcgcaggaactgagcgcctctccccaatgtataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agtagagaaagtgggtctgcaagccctcgcaggaactgagcgcctctccccaatgtataa 372
Query: 181 gcattattctgtataattatggatattttcacttccaaaaatattttttttccagaagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gcattattctgtataattatggatattttcacttccaaaaatattttttttccagaagct 432
Query: 241 gctatttcaaaggctttcaattctgtgtgtcattatcaaataatcttttttgtactcggc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gctatttcaaaggctttcaattctgtgtgtcattatcaaataatcttttttgtactcggg 492
Query: 301 cgcttattattggattgcaacaacgataaagctccaggggtttttgtcttctttggtatg 360
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tgtttattattggattgcaacaacgataaagctccaggggtttttgtcttctttggtatg 552
Query: 361 ctaattagcccgtttccttttgatctttttcctaccgaagagagtgaaaagctatctcgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ctaattagcccgtttccttttgatctttttcctaccgaagagagtgaaaagctatctcgg 612
Query: 421 cggggaatcttagtgctgtacattcatc--------tccataatctgtggatgagaggag 472
|||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 613 cggggaatcttagtgctgtacattcatcccctcatctccataatctgtggatgagaggag 672
Query: 473 gacgacaatttcactactgaattagggtttctaggggctttagttagagctgaggttgcc 532
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 673 gacgacaatttcactgctgaattagggcttctaggggctttagttagagctgaggttgcc 732
Query: 533 cgataatcccgctggcacccccaagttgggcactgtgtaggaagactgcagagtgtggaa 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 cgataatcccgctggcacccccaagttgggcactgtgtaggaagactgcagagtgtggaa 792
Query: 593 aaaaaagcacagagtacttcatttgactgagtgagtgtaattgtttttat 642
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 aaaaaagcacagagtacttcatttgactgagtgagtgtaattgtttttat 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
