Query= MSMg01no176_f11.b1 MSMg01no176_f11.b1 CHROMAT_FILE:
MSMg01no176_f11.b1 PHD_FILE: MSMg01no176_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:58 2005
(318 letters)
>mm_chr14_29180862_29181577
Length = 716
Score = 542 bits (280), Expect = e-158
Identities = 308/318 (96%), Gaps = 2/318 (0%)
Strand = Plus / Plus
Query: 1 tgccattatccaaaaatgccctattatcttcctgaatccttctctgaaagccggcttaga 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tgccattatccaaaaatgccctattatcttcctgaatccttctctgaaagtcggcttaga 260
Query: 61 agtggttcctcaaagcttcctctaagtttttctagctggccttatcttcctctcctgacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtggttcctcaaagcttcctctaagtttttctagctggccttatcttcctctcctgacc 320
Query: 121 tgttgaagctctcaaagtcctggttcaattttctgagagtttagaagccagtatttctcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttgaagctctcaaagtcctggttcaattttctgagagtttagaagccagtatttctcg 380
Query: 181 gagcttccttttcattctttgagtgtctctctcccgtgatcttttgtgggtttgtatggt 240
|||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||
Sbjct: 381 gagcttccttttcattctttgagtctctctctt--gtgatcttttgtgggtttttatggt 438
Query: 241 gaggcaatgccctgccccttatccttttgactcttctctagagaggactacaagacaaca 300
|||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 439 gaggcaatgccctgtcccttatccttctggctcttctctagagaggactacaagacaaca 498
Query: 301 tttctactgttccttcag 318
| ||||||||||||||||
Sbjct: 499 tatctactgttccttcag 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 716
Length adjustment: 9
Effective length of query: 309
Effective length of database: 707
Effective search space: 218463
Effective search space used: 218463
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no176_f11.g1 MSMg01no176_f11.g1 CHROMAT_FILE:
MSMg01no176_f11.g1 PHD_FILE: MSMg01no176_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:58 2005
(255 letters)
>mm_chr14_29342763_29343417
Length = 655
Score = 453 bits (234), Expect = e-132
Identities = 249/258 (96%), Gaps = 8/258 (3%)
Strand = Plus / Minus
Query: 1 tgtcccattaggcggacatcttcccttaacaccaccatactgctgcagaagaggatgggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tgtcccattaggcggacatcttcccttaacaccaccatactgctgcagaagaggatgggt 395
Query: 61 ggacacttgggtcagacttaaactcttcaaattatccattccttcgtctacaaagcagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ggacacttgggtcagacttaaactcttcaaattatccattccttcgtctacaaagcagag 335
Query: 121 tcaaagtactaactcgggtggtcttcgagggtcttaagcaaaacgagagaaggaaccatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tcaaagtactaactcgggtggtcttcgagggtcttaagcaaaacgagagaaggaaccatt 275
Query: 181 agcaccaaacaagaataaatgttattttt----aggacataactatgatcatagaattct 236
|||||||||||||||||||||||| | |||||||||||| ||||||||||||||
Sbjct: 274 agcaccaaacaagaataaatgtta----tcaggaggacataactacgatcatagaattct 219
Query: 237 accttgagaggtgaaggc 254
||||||||||||||||||
Sbjct: 218 accttgagaggtgaaggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 655
Length adjustment: 9
Effective length of query: 246
Effective length of database: 646
Effective search space: 158916
Effective search space used: 158916
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
