Query= MSMg01no176_g11.b1 MSMg01no176_g11.b1 CHROMAT_FILE:
MSMg01no176_g11.b1 PHD_FILE: MSMg01no176_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:48:06 2005
(558 letters)
>mm_chr14_29180841_29181795
Length = 955
Score = 932 bits (482), Expect = 0.0
Identities = 543/574 (94%), Gaps = 19/574 (3%)
Strand = Plus / Plus
Query: 1 caggtccttgtgatgatggcttgccattatccaaaaatgccctattatcttcctgaatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggtccttgtgatgatggcttgccattatccaaaaatgccctattatcttcctgaatcc 260
Query: 61 ttctctgaaagccggcttagaagtggttcctcaaagcttcctctaagtttttctagctgg 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctctgaaagtcggcttagaagtggttcctcaaagcttcctctaagtttttctagctgg 320
Query: 121 ccttatcttcctctcctgacctgttgaagctctcaaagtcctggttcaattttctgagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttatcttcctctcctgacctgttgaagctctcaaagtcctggttcaattttctgagag 380
Query: 181 tttagaagccagtatttctcggagcttccttttcattctttgagtgtctctctcccgtga 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 381 tttagaagccagtatttctcggagcttccttttcattctttgagtctctctctt--gtga 438
Query: 241 tcttttgtgggtttgtatggtgaggcaatgccctgccccttatctttctgactcttctct 300
|||||||||||||| |||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 439 tcttttgtgggtttttatggtgaggcaatgccctgtcccttatccttctggctcttctct 498
Query: 301 agagaggactacaagacaacatttctactgttccttcagcagtgcagagagactaggcat 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 499 agagaggactacaagacaacatatctactgttccttcagcagtgcagagagactaggcat 558
Query: 361 ggacaccgttacgtgtcttcctataatcttcacaatagtcttgagcctgaagactgatgt 420
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 559 ggacactgttacgtgtcttcctagaatcttcacaatagtcttgagcctgaagactgatgt 618
Query: 421 tagcttcgtctgtaagaggcagaggctgaagggtcctctgaagtgtcttctcccatgcag 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 619 tagcttcgtctgtaagaggcagaggctgaagggtcttctgaagtgtcttctcc-atgcag 677
Query: 481 catgaaccaggtggaagaactttgacctctgtgctctgtggctttttgc----------- 529
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 catgaaccaggtggaagaactttgacctctgtgctctgtggctttttgccacccccacta 737
Query: 530 -----aaaggagacttgtgcccaagtcttgggta 558
|||||||||||| ||||||||||||||||
Sbjct: 738 cttgcaaaggagacttgcgcccaagtcttgggta 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 955
Length adjustment: 10
Effective length of query: 548
Effective length of database: 945
Effective search space: 517860
Effective search space used: 517860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no176_g11.g1 MSMg01no176_g11.g1 CHROMAT_FILE:
MSMg01no176_g11.g1 PHD_FILE: MSMg01no176_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:48:06 2005
(652 letters)
>mm_chr14_29342779_29343830
Length = 1052
Score = 955 bits (494), Expect = 0.0
Identities = 509/514 (99%)
Strand = Plus / Minus
Query: 1 gtacgcaatactcccaatccccccagttgacagaacaagtcctctggtcatatacatggg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 514 gtacgcaatactcccaatccccccagttgacagaacaagtcctctggtcatatatatggg 455
Query: 61 gactctgacaaaacaatgtcccattaggcggacatcttcccttaacaccaccatactgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gactctgacaaaacaatgtcccattaggcggacatcttcccttaacaccaccatactgct 395
Query: 121 gcagaagaggatgggtggacacttgggtcagacttaaactcttcaaattatccattcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gcagaagaggatgggtggacacttgggtcagacttaaactcttcaaattatccattcctt 335
Query: 181 cgtctacaaagcagagtcaaagtactaactcgggtggtcttcgagggtcttaagcaaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cgtctacaaagcagagtcaaagtactaactcgggtggtcttcgagggtcttaagcaaaac 275
Query: 241 gagagaaggaaccattagcaccaaacaagaataaatgttatcaggaggacataactatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 274 gagagaaggaaccattagcaccaaacaagaataaatgttatcaggaggacataactacga 215
Query: 301 tcatagaattctaccttgagaggtgaaggcaagaggacagtaagttttgagggctagccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tcatagaattctaccttgagaggtgaaggcaagaggacagtaagttttgagggctagccc 155
Query: 361 aggctacataggcaatgacagcctactaacctactgagtcagagaaaagaaagaaaaggc 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 154 aggctacataggcaatgacagcctactaacctactgagtcagagaaaataaagaaaaggc 95
Query: 421 cagagagacatcttacccaggtaacacaggtttccaagcgacacatcccacactaaggaa 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 94 cagagagacatcttacccaggtaacacaggtttccaagcgacacatcccacactaatgaa 35
Query: 481 gctcagcagcaggcctctcctgcccgtcctaccg 514
||||||||||||||||||||||||||||| ||||
Sbjct: 34 gctcagcagcaggcctctcctgcccgtcccaccg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
